RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 DCTP40126 519 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 SLCO1A2P46721 670 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 MAPK12P53778 367 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 SLC37A1P57057 533 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 PPIAP62937 165 aaKnown RBP6.86□□□□□ -1.31
NUP88-205ENST00000572809 PLGLB1Q02325 96 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 GALNT1Q10472 559 aaPredicted RBP6.86□□□□□ -1.31
NUP88-205ENST00000572809 TBL3Q12788 808 aaKnown RBP6.86□□□□□ -1.31
NUP88-205ENST00000572809 CMPK2Q5EBM0 449 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 SLC22A10Q63ZE4 541 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 OR52E8Q6IFG1 317 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 PAOXQ6QHF9 649 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 RNF111Q6ZNA4 994 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 RGS9BPQ6ZS82 235 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 FAM47EQ6ZV65 393 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 SH2D5Q6ZV89 423 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 GPRIN3Q6ZVF9 776 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 COMMD6Q7Z4G1 85 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 DOLPP1Q86YN1 238 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 C9orf40Q8IXQ3 194 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 SLC34A3Q8N130 599 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 OR2M7Q8NG81 312 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 OR52N2Q8NGI0 321 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 SLC22A8Q8TCC7 542 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 CHTF18Q8WVB6 975 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 ITLN2Q8WWU7 325 aaPredicted RBP6.86□□□□□ -1.31
NUP88-205ENST00000572809 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.86□□□□□ -1.31
NUP88-205ENST00000572809 PPP1R14AQ96A00 147 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 CCDC126Q96EE4 140 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 L3HYPDHQ96EM0 354 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 CCDC120Q96HB5 630 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 TMEM237Q96Q45 408 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 ZNF382Q96SR6 550 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 FAM173AQ9BQD7 235 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 DEFB127Q9H1M4 99 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 PPCSQ9HAB8 311 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 CXorf21Q9HAI6 301 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 SACM1LQ9NTJ5 587 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 VPS29Q9UBQ0 182 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 TINAGQ9UJW2 476 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 CES1P1Q9UKY3 287 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 PSME2Q9UL46 239 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 STK38LQ9Y2H1 464 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 PCDHA9Q9Y5H5 950 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 MYO7BQ6PIF6 2116 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 SPTAN1Q13813 2472 aaKnown RBP6.85□□□□□ -1.31
NUP88-205ENST00000572809 SPTBN1Q01082 2364 aaKnown RBP6.85□□□□□ -1.31
NUP88-205ENST00000572809 C2orf92A0A1B0GVN3 265 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 A0A1W2PS29 197 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 CCDC151A5D8V7 595 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 PINLYPA6NC86 204 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 FOXO6A8MYZ6 492 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 PRSS44E7EML9 344 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 G3V2L1 256 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 ACOT7O00154 380 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 ERAL1O75616 437 aaKnown RBP6.85□□□□□ -1.31
NUP88-205ENST00000572809 SLITRK5O94991 958 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 NADKO95544 446 aaPredicted RBP6.85□□□□□ -1.31
NUP88-205ENST00000572809 ESRRBO95718 433 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 CCL3P10147 92 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 MYL2P10916 166 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 HSD3B1P14060 373 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 CPMP14384 443 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 CHN1P15882 459 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 CD247P20963 164 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 NT5EP21589 574 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 TNFRSF8P28908 595 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 SERPINB3P29508 390 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 PTGER1P34995 402 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 CRHR1P34998 444 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 SMSP52788 366 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 PKNOX1P55347 436 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 NAA20P61599 178 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 TRA2BP62995 288 aaKnown RBP6.85□□□□□ -1.31
NUP88-205ENST00000572809 FUT7Q11130 342 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 CSTF3Q12996 717 aaKnown RBP6.85□□□□□ -1.31
NUP88-205ENST00000572809 ART3Q13508 389 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 ZNF791Q3KP31 576 aaPredicted RBP6.85□□□□□ -1.31
NUP88-205ENST00000572809 CCDC153Q494R4 210 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 TCHHL1Q5QJ38 904 aaPredicted RBP6.85□□□□□ -1.31
NUP88-205ENST00000572809 C6orf163Q5TEZ5 329 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 HLA-DQA1Q5Y7H0 255 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 SLC48A1Q6P1K1 146 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 XKRXQ6PP77 449 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 RPTNQ6XPR3 784 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 FGD2Q7Z6J4 655 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 SLC22A16Q86VW1 577 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 TDRPQ86YL5 185 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 CHERPQ8IWX8 916 aaKnown RBP6.85□□□□□ -1.31
NUP88-205ENST00000572809 DND1Q8IYX4 353 aaKnown RBP6.85□□□□□ -1.31
NUP88-205ENST00000572809 TAGAPQ8N103 731 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 EID3Q8N140 333 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 ZNF808Q8N4W9 903 aaPredicted RBP6.85□□□□□ -1.31
NUP88-205ENST00000572809 C1orf52Q8N6N3 182 aaKnown RBP6.85□□□□□ -1.31
NUP88-205ENST00000572809 CCNYL1Q8N7R7 359 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 GBP7Q8N8V2 638 aaPredicted RBP6.85□□□□□ -1.31
NUP88-205ENST00000572809 FAM57AQ8TBR7 257 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 AGAP11Q8TF27 550 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 RNF141Q8WVD5 230 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 COX4I2Q96KJ9 171 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms