RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ZNF582Q96NG8 517 aaPredicted RBP9.45□□□□□ -0.9
LRRC28-216ENST00000559819 MND1Q9BWT6 205 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 TPK1Q9H3S4 243 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 TMEM165Q9HC07 324 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 CNIH4Q9P003 139 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 SLC9A8Q9Y2E8 581 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 UGT2A1Q9Y4X1 527 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 GOLGA4Q13439 2230 aaKnown RBP9.45□□□□□ -0.9
LRRC28-216ENST00000559819 C2orf16Q68DN1 1984 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 CPSF4LA6NMK7 179 aaKnown RBP9.45□□□□□ -0.9
LRRC28-216ENST00000559819 MYL12BO14950 172 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 SNPHO15079 494 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 TRIM23P36406 574 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 SMIM11AP58511 58 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 MADCAM1Q13477 382 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 LRRC32Q14392 662 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 SNAPC1Q16533 368 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 OCLNQ16625 522 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 ATAT1Q5SQI0 421 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 ATAD3BQ5T9A4 648 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 CCBE1Q6UXH8 406 aaPredicted RBP9.45□□□□□ -0.9
LRRC28-216ENST00000559819 FAM92BQ6ZTR7 304 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 NCCRP1Q6ZVX7 275 aaPredicted RBP9.45□□□□□ -0.9
LRRC28-216ENST00000559819 OR2L3Q8NG85 312 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 OR8D4Q8NGM9 314 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 DOK4Q8TEW6 326 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 PRRC1Q96M27 445 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 KXD1Q9BQD3 176 aa9.45□□□□□ -0.9
LRRC28-216ENST00000559819 RSPH9Q9H1X1 276 aaPredicted RBP9.45□□□□□ -0.9
LRRC28-216ENST00000559819 PHPT1Q9NRX4 125 aaPredicted RBP9.45□□□□□ -0.9
LRRC28-216ENST00000559819 A0A087WUU8 490 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 A0A1W2PQU0 124 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 LOC110117498-PIK3R3F6TDL0 507 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 PLD2O14939 933 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 AZGP1P25311 298 aaKnown RBP9.44□□□□□ -0.9
LRRC28-216ENST00000559819 TIE1P35590 1138 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 IGFALSP35858 605 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 CD79BP40259 229 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 GIPRP48546 466 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 NKX2-5P52952 324 aaPredicted RBP9.44□□□□□ -0.9
LRRC28-216ENST00000559819 DMPKQ09013 629 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 CLEC12AQ5QGZ9 265 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 OR2G6Q5TZ20 316 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 KIAA1211LQ6NV74 962 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 USP30Q70CQ3 517 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 LAX1Q8IWV1 398 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 OR8H2Q8N162 312 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 ASB15Q8WXK1 588 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 OR7D2Q96RA2 312 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 SLC30A2Q9BRI3 323 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 POLDIP3Q9BY77 421 aaKnown RBP9.44□□□□□ -0.9
LRRC28-216ENST00000559819 PITHD1Q9GZP4 211 aaPredicted RBP9.44□□□□□ -0.9
LRRC28-216ENST00000559819 BTBD1Q9H0C5 482 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 SEMA4GQ9NTN9 838 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 FBXL12Q9NXK8 326 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 PRKAG2Q9UGJ0 569 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 CES1P1Q9UKY3 287 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 ENTPD4Q9Y227 616 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 RBMX2Q9Y388 322 aaKnown RBP9.44□□□□□ -0.9
LRRC28-216ENST00000559819 CHST2Q9Y4C5 530 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 AGRPO00253 132 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 PRICKLE3O43900 615 aaPredicted RBP9.44□□□□□ -0.9
LRRC28-216ENST00000559819 CDRT1O95170 752 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 ZIC2O95409 532 aaPredicted RBP9.44□□□□□ -0.9
LRRC28-216ENST00000559819 EML2O95834 649 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 PTTG1O95997 202 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 POU2F2P09086 479 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 F3P13726 295 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 ETV6P41212 452 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 AVPR1BP47901 424 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 GAS1P54826 345 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 TAS2R41P59536 307 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 ALDH6A1Q02252 535 aaKnown RBP9.44□□□□□ -0.9
LRRC28-216ENST00000559819 RPE65Q16518 533 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 TMEM35AQ53FP2 167 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 ZNF311Q5JNZ3 666 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 MRM1Q6IN84 353 aaKnown RBP9.44□□□□□ -0.9
LRRC28-216ENST00000559819 C1orf94Q6P1W5 598 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 UTS2BQ765I0 119 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 PHC2Q8IXK0 858 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 ZNF513Q8N8E2 541 aaPredicted RBP9.44□□□□□ -0.9
LRRC28-216ENST00000559819 SIMC1Q8NDZ2 872 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 NUP43Q8NFH3 380 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 OR9Q1Q8NGQ5 310 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 HERVK_113Q902F9 699 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 FGF11Q92914 225 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 ABHD8Q96I13 439 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 FAM46AQ96IP4 442 aaKnown RBP9.44□□□□□ -0.9
LRRC28-216ENST00000559819 IGFLR1Q9H665 355 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 BCL2L10Q9HD36 194 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 NDUFB11Q9NX14 153 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 ZSCAN32Q9NX65 697 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 SEC14L4Q9UDX3 406 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 DPP7Q9UHL4 492 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 MUTYHQ9UIF7 546 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 POU2F3Q9UKI9 436 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 STUB1Q9UNE7 303 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 RWDD3Q9Y3V2 267 aa9.44□□□□□ -0.9
LRRC28-216ENST00000559819 ATG2BQ96BY7 2078 aa9.43□□□□□ -0.9
LRRC28-216ENST00000559819 TRBV23OR9-2A0A075B6M9 112 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms