RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 SLC22A8Q8TCC7 542 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 OR5P2Q8WZ92 322 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 TESCQ96BS2 214 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 SCMH1Q96GD3 660 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 CLMPQ9H6B4 373 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 CCDC134Q9H6E4 229 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 KLHL1Q9NR64 748 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 HPF1Q9NWY4 346 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 GPR55Q9Y2T6 319 aaPredicted RBP18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 PCDHGB6Q9Y5F9 930 aa18.74■□□□□ 0.59
TSPAN3-207ENST00000559494 SVILO95425 2214 aa18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 SCN2BO60939 215 aa18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 PSMG1O95456 288 aa18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 C6orf47O95873 294 aa18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 IDO1P14902 403 aa18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 CD46P15529 392 aa18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 DRD5P21918 477 aa18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 PPICP45877 212 aa18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 SRSF11Q05519 484 aaKnown RBP18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 RPS6KA2Q15349 733 aa18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 ZNF791Q3KP31 576 aaPredicted RBP18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 PDCD4Q53EL6 469 aaKnown RBP18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 PRR30Q53SZ7 412 aaPredicted RBP18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 PRICKLE2Q7Z3G6 844 aa18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 GPALPP1Q8IXQ4 340 aa18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 OR8J2Q8NGG1 315 aa18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 LCORQ96JN0 433 aaPredicted RBP18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 VSTM2LQ96N03 204 aa18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 FOLH1BQ9HBA9 442 aa18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 NPHS2Q9NP85 383 aa18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 SIRT3Q9NTG7 399 aaPredicted RBP18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 DDX18Q9NVP1 670 aaKnown RBP18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 TAS2R9Q9NYW1 312 aa18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 NTMQ9P121 344 aa18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 ERVK-11Q9UQG0 969 aa18.73■□□□□ 0.59
TSPAN3-207ENST00000559494 C9JVG2 144 aa18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 E9PBE3 544 aa18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 POLR3GO15318 223 aaPredicted RBP18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 SLC25A12O75746 678 aa18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 FBXO45P0C2W1 286 aa18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 CT45A8P0DMV1 189 aa18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 CT45A9P0DMV2 189 aa18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 CLNS1AP54105 237 aaKnown RBP18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 DCAF7P61962 342 aa18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 INPP5JQ15735 1006 aaPredicted RBP18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 NNATQ16517 81 aa18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 MAPKAPK3Q16644 382 aa18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 GSTA3Q16772 222 aa18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 CT45A2Q5DJT8 189 aa18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 SPANXN4Q5MJ08 99 aa18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 GALNTL5Q7Z4T8 443 aa18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 TAGAPQ8N103 731 aa18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 SNRNP40Q96DI7 357 aaKnown RBP18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 C5orf34Q96MH7 638 aa18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 SDR39U1Q9NRG7 319 aaPredicted RBP18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 MAP10Q9P2G4 905 aa18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 DCTN4Q9UJW0 460 aa18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 NTNG1Q9Y2I2 539 aa18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 NPFFR2Q9Y5X5 522 aa18.72■□□□□ 0.59
TSPAN3-207ENST00000559494 NINQ8N4C6 2090 aa18.71■□□□□ 0.59
TSPAN3-207ENST00000559494 SHANK1Q9Y566 2161 aa18.71■□□□□ 0.59
TSPAN3-207ENST00000559494 SPENQ96T58 3664 aaKnown RBP18.71■□□□□ 0.59
TSPAN3-207ENST00000559494 SLC28A2O43868 658 aa18.71■□□□□ 0.59
TSPAN3-207ENST00000559494 COQ9O75208 318 aa18.71■□□□□ 0.59
TSPAN3-207ENST00000559494 VIMP08670 466 aaKnown RBP18.71■□□□□ 0.59
TSPAN3-207ENST00000559494 KIR3DL1P43629 444 aa18.71■□□□□ 0.59
TSPAN3-207ENST00000559494 DGKQP52824 942 aa18.71■□□□□ 0.59
TSPAN3-207ENST00000559494 CORO7P57737 925 aa18.71■□□□□ 0.59
TSPAN3-207ENST00000559494 PRR22Q8IZ63 422 aa18.71■□□□□ 0.59
TSPAN3-207ENST00000559494 CLECL1Q8IZS7 167 aa18.71■□□□□ 0.59
TSPAN3-207ENST00000559494 PSMA8Q8TAA3 256 aa18.71■□□□□ 0.59
TSPAN3-207ENST00000559494 TMEM125Q96AQ2 219 aa18.71■□□□□ 0.59
TSPAN3-207ENST00000559494 BTBD9Q96Q07 612 aa18.71■□□□□ 0.59
TSPAN3-207ENST00000559494 TAAR6Q96RI8 345 aa18.71■□□□□ 0.59
TSPAN3-207ENST00000559494 TRIM4Q9C037 500 aa18.71■□□□□ 0.59
TSPAN3-207ENST00000559494 CXorf36Q9H7Y0 433 aa18.71■□□□□ 0.59
TSPAN3-207ENST00000559494 RYDENQ9NUL5 291 aaKnown RBP18.71■□□□□ 0.59
TSPAN3-207ENST00000559494 FGFR1OP2Q9NVK5 253 aa18.71■□□□□ 0.59
TSPAN3-207ENST00000559494 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 TO15178 435 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 EMC8O43402 210 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 NME2P1O60361 137 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 ERN1O75460 977 aaKnown RBP18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 NME2P22392 152 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 S100A3P33764 101 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 ZFP36L2P47974 494 aaKnown RBP18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 PRKAG1P54619 331 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 HBA1P69905 142 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 TLE1Q04724 770 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 FAM174BQ3ZCQ3 159 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 CGB2Q6NT52 195 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 NPSR1Q6W5P4 371 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 RTL4Q6ZR62 310 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 WDR53Q7Z5U6 358 aaPredicted RBP18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 ZNF605Q86T29 641 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 NUP43Q8NFH3 380 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 CPT1CQ8TCG5 803 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 STON2Q8WXE9 905 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 SPACA9Q96E40 222 aaPredicted RBP18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 FAM120BQ96EK7 910 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms