RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 FOLH1BQ9HBA9 442 aa17.24■□□□□ 0.35
CASC4-209ENST00000559222 OLAHQ9NV23 265 aa17.24■□□□□ 0.35
CASC4-209ENST00000559222 NOP53Q9NZM5 478 aaKnown RBP17.24■□□□□ 0.35
CASC4-209ENST00000559222 EIF3LQ9Y262 564 aaKnown RBP17.24■□□□□ 0.35
CASC4-209ENST00000559222 PRRC2CQ9Y520 2896 aaKnown RBP17.23■□□□□ 0.35
CASC4-209ENST00000559222 SVILO95425 2214 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 C9JVG2 144 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 ANKRD28O15084 1053 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 PEX1O43933 1283 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 PLOD3O60568 738 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 PSMG1O95456 288 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 CBX6O95503 412 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 LBPP18428 481 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 PIGAP37287 484 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 DNASE1L1P49184 302 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 NME5P56597 212 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 PRAMEF20Q5VT98 475 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 BICRALQ6AI39 1079 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 HOMEZQ8IX15 550 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 GPALPP1Q8IXQ4 340 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 GALNT11Q8NCW6 608 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 FAM13CQ8NE31 585 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 LRRC8CQ8TDW0 803 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 TP53INP1Q96A56 240 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 ELP4Q96EB1 424 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 OR52B2Q96RD2 323 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 PROK2Q9HC23 129 aa17.23■□□□□ 0.35
CASC4-209ENST00000559222 SIRT3Q9NTG7 399 aaPredicted RBP17.23■□□□□ 0.35
CASC4-209ENST00000559222 INTS9Q9NV88 658 aaKnown RBP17.23■□□□□ 0.35
CASC4-209ENST00000559222 CHCHD2Q9Y6H1 151 aaPredicted RBP17.23■□□□□ 0.35
CASC4-209ENST00000559222 UBR5O95071 2799 aaPredicted RBP17.23■□□□□ 0.35
CASC4-209ENST00000559222 CDK2AP1O14519 115 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 CT45A8P0DMV1 189 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 CT45A9P0DMV2 189 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 ABCD3P28288 659 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 CLDN8P56748 225 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 KCNK10P57789 538 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 SRSF1Q07955 248 aaKnown RBP eCLIP17.22■□□□□ 0.35
CASC4-209ENST00000559222 ZNF155Q12901 538 aaPredicted RBP17.22■□□□□ 0.35
CASC4-209ENST00000559222 SMU1Q2TAY7 513 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 CT45A2Q5DJT8 189 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 TMEM198Q66K66 360 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 FAM47EQ6ZV65 393 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 SIAH3Q8IW03 269 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 OR2L13Q8N349 312 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 SLC15A4Q8N697 577 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 OR2M7Q8NG81 312 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 OR4N2Q8NGD1 307 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 DYDC1Q8WWB3 177 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 MTERF3Q96E29 417 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 LCORQ96JN0 433 aaPredicted RBP17.22■□□□□ 0.35
CASC4-209ENST00000559222 TEX37Q96LM6 180 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 TIMMDC1Q9NPL8 285 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 AGPAT4Q9NRZ5 378 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 CNOT11Q9UKZ1 510 aaKnown RBP17.22■□□□□ 0.35
CASC4-209ENST00000559222 C19orf53Q9UNZ5 99 aaPredicted RBP17.22■□□□□ 0.35
CASC4-209ENST00000559222 GPR55Q9Y2T6 319 aaPredicted RBP17.22■□□□□ 0.35
CASC4-209ENST00000559222 KLF13Q9Y2Y9 288 aaPredicted RBP17.22■□□□□ 0.35
CASC4-209ENST00000559222 HRH3Q9Y5N1 445 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 NPFFR2Q9Y5X5 522 aa17.22■□□□□ 0.35
CASC4-209ENST00000559222 ZGRF1Q86YA3 2104 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 NUP214P35658 2090 aaPredicted RBP17.21■□□□□ 0.35
CASC4-209ENST00000559222 NINQ8N4C6 2090 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 A0A087WV62 115 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 PLOD2O00469 737 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 VPS4BO75351 444 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 MAD2L1Q13257 205 aaPredicted RBP17.21■□□□□ 0.35
CASC4-209ENST00000559222 NTRK2Q16620 822 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 EIF2S3LQ2VIR3 472 aaKnown RBP17.21■□□□□ 0.35
CASC4-209ENST00000559222 OGFOD2Q6N063 350 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 R3HCC1LQ7Z5L2 792 aaKnown RBP17.21■□□□□ 0.35
CASC4-209ENST00000559222 KIRREL3Q8IZU9 778 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 TAGAPQ8N103 731 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 GOLM1Q8NBJ4 401 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 C17orf47Q8NEP4 570 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 FBXO30Q8TB52 745 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 PIWIL2Q8TC59 973 aaKnown RBP17.21■□□□□ 0.35
CASC4-209ENST00000559222 PAQR8Q8TEZ7 354 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 CKAP2Q8WWK9 683 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 COQ8BQ96D53 544 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 OMA1Q96E52 524 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 MAELQ96JY0 434 aaKnown RBP17.21■□□□□ 0.35
CASC4-209ENST00000559222 C7orf26Q96N11 449 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 BTBD9Q96Q07 612 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 EQTNQ9NQ60 294 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 DDX18Q9NVP1 670 aaKnown RBP17.21■□□□□ 0.35
CASC4-209ENST00000559222 AIG1Q9NVV5 245 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 PRODH2Q9UF12 536 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 VPS4AQ9UN37 437 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 USH1CQ9Y6N9 552 aa17.21■□□□□ 0.35
CASC4-209ENST00000559222 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.2■□□□□ 0.34
CASC4-209ENST00000559222 FRG2CA6NGY1 282 aa17.2■□□□□ 0.34
CASC4-209ENST00000559222 ERN1O75460 977 aaKnown RBP17.2■□□□□ 0.34
CASC4-209ENST00000559222 C6orf47O95873 294 aa17.2■□□□□ 0.34
CASC4-209ENST00000559222 PRPS1L1P21108 318 aa17.2■□□□□ 0.34
CASC4-209ENST00000559222 IL12AP29459 219 aa17.2■□□□□ 0.34
CASC4-209ENST00000559222 GPC1P35052 558 aa17.2■□□□□ 0.34
CASC4-209ENST00000559222 PPICP45877 212 aa17.2■□□□□ 0.34
CASC4-209ENST00000559222 MANFP55145 182 aaKnown RBP17.2■□□□□ 0.34
CASC4-209ENST00000559222 WNT3P56703 355 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms