RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 BCAP29Q9UHQ4 241 aa16.83■□□□□ 0.28
CLPX-203ENST00000558958 PPIEQ9UNP9 301 aaKnown RBP16.83■□□□□ 0.28
CLPX-203ENST00000558958 A0A1W2PQ72 361 aa16.82■□□□□ 0.28
CLPX-203ENST00000558958 SOCS6O14544 535 aa16.82■□□□□ 0.28
CLPX-203ENST00000558958 PRAMEF2O60811 474 aa16.82■□□□□ 0.28
CLPX-203ENST00000558958 NME6O75414 186 aaPredicted RBP16.82■□□□□ 0.28
CLPX-203ENST00000558958 TNFRSF21O75509 655 aa16.82■□□□□ 0.28
CLPX-203ENST00000558958 BMP2P12643 396 aa16.82■□□□□ 0.28
CLPX-203ENST00000558958 ETFAP13804 333 aa16.82■□□□□ 0.28
CLPX-203ENST00000558958 MATN1P21941 496 aa16.82■□□□□ 0.28
CLPX-203ENST00000558958 MAN2A2P49641 1150 aa16.82■□□□□ 0.28
CLPX-203ENST00000558958 GPR143P51810 404 aa16.82■□□□□ 0.28
CLPX-203ENST00000558958 SLC37A1P57057 533 aa16.82■□□□□ 0.28
CLPX-203ENST00000558958 EEF1A2Q05639 463 aaKnown RBP16.82■□□□□ 0.28
CLPX-203ENST00000558958 TNFAIP8L2Q6P589 184 aaPredicted RBP16.82■□□□□ 0.28
CLPX-203ENST00000558958 KIRREL2Q6UWL6 708 aa16.82■□□□□ 0.28
CLPX-203ENST00000558958 PPP1R32Q7Z5V6 425 aa16.82■□□□□ 0.28
CLPX-203ENST00000558958 HPS6Q86YV9 775 aa16.82■□□□□ 0.28
CLPX-203ENST00000558958 ZNF321PQ8N8H1 164 aa16.82■□□□□ 0.28
CLPX-203ENST00000558958 OR1N1Q8NGS0 311 aa16.82■□□□□ 0.28
CLPX-203ENST00000558958 ACTRT3Q9BYD9 372 aa16.82■□□□□ 0.28
CLPX-203ENST00000558958 ZNF700Q9H0M5 742 aa16.82■□□□□ 0.28
CLPX-203ENST00000558958 IL17BQ9UHF5 180 aa16.82■□□□□ 0.28
CLPX-203ENST00000558958 FAF1Q9UNN5 650 aaPredicted RBP16.82■□□□□ 0.28
CLPX-203ENST00000558958 MSRB2Q9Y3D2 182 aa16.82■□□□□ 0.28
CLPX-203ENST00000558958 AKAP13Q12802 2813 aa16.82■□□□□ 0.28
CLPX-203ENST00000558958 IGHV1-45A0A0A0MS14 117 aa16.81■□□□□ 0.28
CLPX-203ENST00000558958 SEC24DO94855 1032 aaPredicted RBP16.81■□□□□ 0.28
CLPX-203ENST00000558958 SORBS2O94875 1100 aaKnown RBP16.81■□□□□ 0.28
CLPX-203ENST00000558958 NQO1P15559 274 aaKnown RBP16.81■□□□□ 0.28
CLPX-203ENST00000558958 ME2P23368 584 aa16.81■□□□□ 0.28
CLPX-203ENST00000558958 PRIM2P49643 509 aa16.81■□□□□ 0.28
CLPX-203ENST00000558958 TXNL4AP83876 142 aaKnown RBP16.81■□□□□ 0.28
CLPX-203ENST00000558958 PCOLCEQ15113 449 aa16.81■□□□□ 0.28
CLPX-203ENST00000558958 ADRM1Q16186 407 aa16.81■□□□□ 0.28
CLPX-203ENST00000558958 EXOSC6Q5RKV6 272 aaKnown RBP16.81■□□□□ 0.28
CLPX-203ENST00000558958 ZCCHC12Q6PEW1 402 aa16.81■□□□□ 0.28
CLPX-203ENST00000558958 NET1Q7Z628 596 aaPredicted RBP16.81■□□□□ 0.28
CLPX-203ENST00000558958 IFNEQ86WN2 208 aa16.81■□□□□ 0.28
CLPX-203ENST00000558958 B3GNT7Q8NFL0 401 aa16.81■□□□□ 0.28
CLPX-203ENST00000558958 OR2T12Q8NG77 320 aa16.81■□□□□ 0.28
CLPX-203ENST00000558958 C16orf52Q8NHV5 167 aa16.81■□□□□ 0.28
CLPX-203ENST00000558958 HOXB13Q92826 284 aaPredicted RBP16.81■□□□□ 0.28
CLPX-203ENST00000558958 KIAA1143Q96AT1 154 aaPredicted RBP16.81■□□□□ 0.28
CLPX-203ENST00000558958 KCTD14Q9BQ13 255 aaPredicted RBP16.81■□□□□ 0.28
CLPX-203ENST00000558958 YIPF4Q9BSR8 244 aa16.81■□□□□ 0.28
CLPX-203ENST00000558958 NUDT9Q9BW91 350 aa16.81■□□□□ 0.28
CLPX-203ENST00000558958 SPATA9Q9BWV2 254 aa16.81■□□□□ 0.28
CLPX-203ENST00000558958 OR51I1Q9H343 314 aa16.81■□□□□ 0.28
CLPX-203ENST00000558958 GPN2Q9H9Y4 310 aaPredicted RBP16.81■□□□□ 0.28
CLPX-203ENST00000558958 USP22Q9UPT9 525 aa16.81■□□□□ 0.28
CLPX-203ENST00000558958 HEMK1Q9Y5R4 338 aaPredicted RBP16.81■□□□□ 0.28
CLPX-203ENST00000558958 MRPS18BQ9Y676 258 aaKnown RBP16.81■□□□□ 0.28
CLPX-203ENST00000558958 CFAP73A6NFT4 308 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 FAM220BPB1ANY3 271 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 HMGN4O00479 90 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 NUDT7P0C024 238 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 COX6A1P12074 109 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 TCN1P20061 433 aaPredicted RBP16.8■□□□□ 0.28
CLPX-203ENST00000558958 OTX2P32243 289 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 MAP3K8P41279 467 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 KHKP50053 298 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 DSTNP60981 165 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 CYP51A1Q16850 503 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 CDC73Q6P1J9 531 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 RNF111Q6ZNA4 994 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 PTOV1Q86YD1 416 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 LGI4Q8N135 537 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 CDRT4Q8N9R6 151 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 SLC16A11Q8NCK7 471 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 APCDD1LQ8NCL9 501 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 FAM156AQ8NDB6 213 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 OR11G2Q8NGC1 345 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 OR5D16Q8NGK9 328 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 NCLNQ969V3 563 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 REXO5Q96IC2 774 aaKnown RBP16.8■□□□□ 0.28
CLPX-203ENST00000558958 VSTM2LQ96N03 204 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 RAB3IPQ96QF0 476 aaPredicted RBP16.8■□□□□ 0.28
CLPX-203ENST00000558958 SEMA4CQ9C0C4 833 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 FOLH1BQ9HBA9 442 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 COPS7AQ9UBW8 275 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 PRODH2Q9UF12 536 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 SLC7A8Q9UHI5 535 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 ASNA1O43681 348 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 CREG1O75629 220 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 OR12D1P0DN82 309 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 LIFP15018 202 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 HTR1EP28566 365 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 MSX2P35548 267 aaPredicted RBP16.8■□□□□ 0.28
CLPX-203ENST00000558958 ANXA11P50995 505 aaKnown RBP16.8■□□□□ 0.28
CLPX-203ENST00000558958 SLC26A5P58743 744 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 ZNF155Q12901 538 aaPredicted RBP16.8■□□□□ 0.28
CLPX-203ENST00000558958 IL10RAQ13651 578 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 FXNQ16595 210 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 GCNT6Q5T4J0 391 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 WDR53Q7Z5U6 358 aaPredicted RBP16.8■□□□□ 0.28
CLPX-203ENST00000558958 ZZZ3Q8IYH5 903 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 FBXO30Q8TB52 745 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 JADE3Q92613 823 aa16.8■□□□□ 0.28
CLPX-203ENST00000558958 RAB8BQ92930 207 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms