RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 KCND3Q9UK17 655 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 PTBP2Q9UKA9 531 aaKnown RBP3.98□□□□□ -1.77
SPG11-211ENST00000558561 SNX7Q9UNH6 387 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 KLK4Q9Y5K2 254 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 HS3ST3B1Q9Y662 390 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 COMMD10Q9Y6G5 202 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 PCNX3Q9H6A9 2034 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 FREM3P0C091 2139 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 BAHCC1Q9P281 2608 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 NINQ8N4C6 2090 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 GCN1Q92616 2671 aaKnown RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 KCNE1BA0A087WTH5 132 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 A0A1B0GX78 115 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 TRIM49D1C9J1S8 452 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 SAP18O00422 153 aaKnown RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 PFDN6O15212 129 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 SLC16A5O15375 505 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 CHST10O43529 356 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 SRPX2O60687 465 aaPredicted RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 PEX14O75381 377 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 RDH16O75452 317 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 CDC123O75794 336 aaPredicted RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 WDR47O94967 919 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 BMP10O95393 424 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 ETHE1O95571 254 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 C8GP07360 202 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 RAB40ALP0C0E4 278 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 ENO3P13929 434 aaPredicted RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 STMN1P16949 149 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 MST1P26927 711 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 PPP2R1BP30154 601 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 HNRNPH1P31943 449 aaKnown RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 SPRP35270 261 aaPredicted RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 CCR10P46092 362 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 RGS4P49798 205 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 UCNP55089 124 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 RAB10P61026 200 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 EEF1A2Q05639 463 aaKnown RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 BTKQ06187 659 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 DOC2AQ14183 400 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 ARHGAP19Q14CB8 494 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 RBBP5Q15291 538 aaKnown RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 TGFBIQ15582 683 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 MAPKAPK3Q16644 382 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 TTLL9Q3SXZ7 439 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 RNASE12Q5GAN4 147 aaKnown RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 TEX35Q5T0J7 233 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 ATG9BQ674R7 924 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 FCRLBQ6BAA4 426 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 HIST2H2BCQ6DN03 193 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 GRHL2Q6ISB3 625 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 CAPN13Q6MZZ7 669 aaPredicted RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 TLDC1Q6P9B6 456 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 C16orf47Q6ZP98 133 aaPredicted RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 DGAT2L6Q6ZPD8 337 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 SH2D5Q6ZV89 423 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 PTCHD4Q6ZW05 846 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 SLC29A4Q7RTT9 530 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 ADGRG3Q86Y34 549 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 NKAPQ8N5F7 415 aaKnown RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 MFSD9Q8NBP5 474 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 OR11G2Q8NGC1 345 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 OR2Y1Q8NGV0 311 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 OR8K5Q8NH50 307 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 OR51Q1Q8NH59 317 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 MBD3L2Q8NHZ7 208 aaPredicted RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 KIF18AQ8NI77 898 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 SUN3Q8TAQ9 357 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 MAGEC3Q8TD91 643 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 UTP15Q8TED0 518 aaKnown RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 APOBEC4Q8WW27 367 aaKnown RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 SLC44A1Q8WWI5 657 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 SLC13A3Q8WWT9 602 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 SLC5A11Q8WWX8 675 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 TSLPQ969D9 159 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 MUL1Q969V5 352 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 KIAA1143Q96AT1 154 aaPredicted RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 SLC22A18Q96BI1 424 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 SARAFQ96BY9 339 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 REPS1Q96D71 796 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 CABS1Q96KC9 395 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 F2RL3Q96RI0 385 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 CYTH2Q99418 400 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 NPAS2Q99743 824 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 CPNE1Q99829 537 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 EGFL8Q99944 293 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 WDR77Q9BQA1 342 aaPredicted RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 RAB17Q9H0T7 212 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 SLC25A18Q9H1K4 315 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 RHBGQ9H310 441 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 ANKZF1Q9H8Y5 726 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 LIN28AQ9H9Z2 209 aaKnown RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 MLXIPLQ9NP71 852 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 CCDC177Q9NQR7 707 aaPredicted RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 NECTIN3Q9NQS3 549 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 SNX15Q9NRS6 342 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 FAM114A2Q9NRY5 505 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 TXLNGQ9NUQ3 528 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 TMEM216Q9P0N5 145 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 SH3BP4Q9P0V3 963 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms