RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 ZDHHC1Q8WTX9 485 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 IGSF8Q969P0 613 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 PHOX2BQ99453 314 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 STRA6Q9BX79 667 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 CDH20Q9HBT6 801 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 IL17CQ9P0M4 197 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 PCTPQ9UKL6 214 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 AKAP12Q02952 1782 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 AGAP5A6NIR3 686 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 A8MVJ9 347 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 CREBL2O60519 120 aaPredicted RBP10.2□□□□□ -0.78
ACTN1-216ENST00000556083 HLA-EP13747 358 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 FKBP2P26885 142 aaKnown RBP10.2□□□□□ -0.78
ACTN1-216ENST00000556083 GNRHRP30968 328 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 CXCR4P61073 352 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 CPZQ66K79 652 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 WDR53Q7Z5U6 358 aaPredicted RBP10.2□□□□□ -0.78
ACTN1-216ENST00000556083 SLC39A11Q8N1S5 342 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 FAM3CQ92520 227 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 TCEAL4Q96EI5 215 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 AMBNQ9NP70 447 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 PDLIM7Q9NR12 457 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 SDR39U1Q9NRG7 319 aaPredicted RBP10.2□□□□□ -0.78
ACTN1-216ENST00000556083 POT1Q9NUX5 634 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 HPF1Q9NWY4 346 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 MCTS1Q9ULC4 181 aaKnown RBP10.2□□□□□ -0.78
ACTN1-216ENST00000556083 ICKQ9UPZ9 632 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 FXYD6-FXYD2A0A087WZ82 144 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 AGRPO00253 132 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 ZNF43P17038 809 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 CHRNB4P30926 498 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 MOGSQ13724 837 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 SGCAQ16586 387 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 PROX2Q3B8N5 592 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 TMEM244Q5VVB8 128 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 OPN5Q6U736 354 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 Q8N9G6 341 aaPredicted RBP10.2□□□□□ -0.78
ACTN1-216ENST00000556083 OR4K1Q8NGD4 311 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 RNF128Q8TEB7 428 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 C12orf43Q96C57 262 aaKnown RBP10.2□□□□□ -0.78
ACTN1-216ENST00000556083 FXYD6Q9H0Q3 95 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 KCNK13Q9HB14 408 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 ACSS1Q9NUB1 689 aaPredicted RBP10.2□□□□□ -0.78
ACTN1-216ENST00000556083 PHRF1Q9P1Y6 1649 aaKnown RBP10.2□□□□□ -0.78
ACTN1-216ENST00000556083 KHNYNO15037 678 aaKnown RBP10.2□□□□□ -0.78
ACTN1-216ENST00000556083 RAC2P15153 192 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 FOLR3P41439 243 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 S100A10P60903 97 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 BDH1Q02338 343 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 TLE3Q04726 772 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 C16orf78Q8WTQ4 265 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 SNAPC3Q92966 411 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 SCAMP4Q969E2 229 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 PHB2Q99623 299 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 DNTTIP1Q9H147 329 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 CARD8Q9Y2G2 431 aa10.2□□□□□ -0.78
ACTN1-216ENST00000556083 TRBV2A0A0J9YWF9 115 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 A8MU76 341 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 BPIP17213 487 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 CHMP24386 653 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 AK4P27144 223 aaPredicted RBP10.19□□□□□ -0.78
ACTN1-216ENST00000556083 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.19□□□□□ -0.78
ACTN1-216ENST00000556083 OR10T2Q8NGX3 314 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 RRNAD1Q96FB5 475 aaKnown RBP10.19□□□□□ -0.78
ACTN1-216ENST00000556083 IRF2BPLQ9H1B7 796 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 ATPIF1Q9UII2 106 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 CFAP20Q9Y6A4 193 aaKnown RBP10.19□□□□□ -0.78
ACTN1-216ENST00000556083 SNNO75324 88 aaPredicted RBP10.19□□□□□ -0.78
ACTN1-216ENST00000556083 TP53P04637 393 aaPredicted RBP10.19□□□□□ -0.78
ACTN1-216ENST00000556083 GTF2F2P13984 249 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 AMY2BP19961 511 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 CD40LGP29965 261 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 CPOXP36551 454 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 MC3RP41968 323 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 RAET1LQ5VY80 246 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 LANCL3Q6ZV70 420 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 VASH1Q7L8A9 365 aaPredicted RBP10.19□□□□□ -0.78
ACTN1-216ENST00000556083 TMEM74Q96NL1 305 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 TREM1Q9NP99 234 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 DNAJC27Q9NZQ0 273 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 NUP50Q9UKX7 468 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 TMEM233B4DJY2 109 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 C8orf89P0DMQ9 161 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 CSF2RAP15509 400 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 LHCGRP22888 699 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 TSFMP43897 325 aaKnown RBP10.19□□□□□ -0.78
ACTN1-216ENST00000556083 CDH15P55291 814 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 SNTB2Q13425 540 aaKnown RBP10.19□□□□□ -0.78
ACTN1-216ENST00000556083 BCL2L15Q5TBC7 163 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 CEACAM19Q7Z692 300 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 TSPAN33Q86UF1 283 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 CMTM1Q8IZ96 169 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 ZNF619Q8N2I2 560 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 SAMD12Q8N8I0 201 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 UCN3Q969E3 161 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 HSPBAP1Q96EW2 488 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 OR1F2PQ96R84 312 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 CHIAQ9BZP6 476 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 CNOT2Q9NZN8 540 aaKnown RBP10.19□□□□□ -0.78
ACTN1-216ENST00000556083 IGLON5A6NGN9 336 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms