RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.5□□□□□ -0.73
SRP54-205ENST00000554803 D6RAR5 112 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 TNFRSF11BO00300 401 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 TOR1BO14657 336 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 WBP4O75554 376 aaKnown RBP10.5□□□□□ -0.73
SRP54-205ENST00000554803 OXSR1O95747 527 aaPredicted RBP10.5□□□□□ -0.73
SRP54-205ENST00000554803 SOD1P00441 154 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 CD82P27701 267 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 TIA1P31483 386 aaKnown RBP eCLIP10.5□□□□□ -0.73
SRP54-205ENST00000554803 CCKBRP32239 447 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 CCR7P32248 378 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 RABIFP47224 123 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 PRIM2P49643 509 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 SMIM11AP58511 58 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 KCNJ10P78508 379 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 PLIN5Q00G26 463 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 SGCGQ13326 291 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 FZD2Q14332 565 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 RGNQ15493 299 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 TIGD6Q17RP2 521 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 MICAQ29983 383 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 IQCCQ4KMZ1 466 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 ATP13A5Q4VNC0 1218 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 CRB2Q5IJ48 1285 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 SPANXN2Q5MJ10 180 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 GCNT6Q5T4J0 391 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 Q6ZSR6 202 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 PAGE2Q7Z2X7 111 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 PARGQ86W56 976 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 ENTHD1Q8IYW4 607 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 LINC00471Q8N535 108 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 TRAM1L1Q8N609 369 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 PLA2G15Q8NCC3 412 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 OR52N2Q8NGI0 321 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 PSMA8Q8TAA3 256 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 LMX1AQ8TE12 382 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 RASSF5Q8WWW0 418 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 PROX1Q92786 737 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 TMCO6Q96DC7 493 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 APIPQ96GX9 242 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 ZNF764Q96H86 408 aaPredicted RBP10.5□□□□□ -0.73
SRP54-205ENST00000554803 VPS35Q96QK1 796 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 GFM1Q96RP9 751 aaKnown RBP10.5□□□□□ -0.73
SRP54-205ENST00000554803 FAM83DQ9H4H8 585 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 ZNF768Q9H5H4 540 aaKnown RBP10.5□□□□□ -0.73
SRP54-205ENST00000554803 CCDC177Q9NQR7 707 aaPredicted RBP10.5□□□□□ -0.73
SRP54-205ENST00000554803 ZNF71Q9NQZ8 489 aaPredicted RBP10.5□□□□□ -0.73
SRP54-205ENST00000554803 SLC6A13Q9NSD5 602 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 IMPAD1Q9NX62 359 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 FOXJ2Q9P0K8 574 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 ZNF229Q9UJW7 825 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 DOLKQ9UPQ8 538 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 ANGPT4Q9Y264 503 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 U3KQV3 271 aa10.5□□□□□ -0.73
SRP54-205ENST00000554803 SPTY2D1-AS1A0A0U1RR47 76 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 IRGMA1A4Y4 181 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 ASNA1O43681 348 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 TBX19O60806 448 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 TRAPPC2P0DI81 140 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 TRAPPC2BP0DI82 140 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 TACR1P25103 407 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 ETV5P41161 510 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 CDKN2CP42773 168 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 UQCRFS1P47985 274 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 PCYT1AP49585 367 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 PFN3P60673 137 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 VBP1P61758 197 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 RHAGQ02094 409 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 RIPPLY1Q0D2K3 151 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 PDE7AQ13946 482 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 IRF3Q14653 427 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 WSCD2Q2TBF2 565 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 ZNF648Q5T619 568 aaPredicted RBP10.49□□□□□ -0.73
SRP54-205ENST00000554803 DEPDC1Q5TB30 811 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 HIST2H2AA3Q6FI13 130 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 AHSA2Q719I0 299 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 GALNT5Q7Z7M9 940 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 AKAP14Q86UN6 197 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 THOC6Q86W42 341 aaKnown RBP10.49□□□□□ -0.73
SRP54-205ENST00000554803 NRSN1Q8IZ57 195 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 CADM3Q8N126 398 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 OR10G2Q8NGC3 310 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 OR4C15Q8NGM1 316 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 OR56A3Q8NH54 315 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 CLHC1Q8NHS4 586 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 BTN2A2Q8WVV5 523 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 AP2M1Q96CW1 435 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 BMFQ96LC9 184 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 BTBD2Q9BX70 525 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 C1QTNF7Q9BXJ2 289 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 REEP4Q9H6H4 257 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 MYNNQ9NPC7 610 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 MBNL1Q9NR56 388 aaKnown RBP10.49□□□□□ -0.73
SRP54-205ENST00000554803 KLF15Q9UIH9 416 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 UTS2RQ9UKP6 389 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 ERVK-11Q9UQG0 969 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 IFT52Q9Y366 437 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 LOXL2Q9Y4K0 774 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 PCDHGA3Q9Y5H0 932 aa10.49□□□□□ -0.73
SRP54-205ENST00000554803 LYVE1Q9Y5Y7 322 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms