RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 RFTN2Q52LD8 501 aaPredicted RBP5.61□□□□□ -1.51
VPS33B-203ENST00000554264 ALFQ53S48 1182 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 ZRANB3Q5FWF4 1079 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 ARMCX4Q5H9R4 360 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 SPANXN4Q5MJ08 99 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 WDR45BQ5MNZ6 344 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 CTSL3PQ5NE16 218 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 LDLRAP1Q5SW96 308 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 TPRG1LQ5T0D9 272 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 AGAP6Q5VW22 663 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 RNLSQ5VYX0 342 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 RAP1GAP2Q684P5 730 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 LAIR2Q6ISS4 152 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 ENPP6Q6UWR7 440 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 GCNT7Q6ZNI0 430 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 KIAA1549LQ6ZVL6 1849 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 SLC46A3Q7Z3Q1 461 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 CAMKMTQ7Z624 323 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 ADGRE4PQ86SQ3 457 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 LDB1Q86U70 411 aaPredicted RBP5.61□□□□□ -1.51
VPS33B-203ENST00000554264 HEATR4Q86WZ0 1026 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 SLC44A2Q8IWA5 706 aaPredicted RBP5.61□□□□□ -1.51
VPS33B-203ENST00000554264 SCN4BQ8IWT1 228 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 CPNE9Q8IYJ1 553 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 CHPFQ8IZ52 775 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 LIX1Q8N485 282 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.61□□□□□ -1.51
VPS33B-203ENST00000554264 FRMD1Q8N878 549 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 PNPLA1Q8N8W4 532 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 POC5Q8NA72 575 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 ATG16L2Q8NAA4 619 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 SIDT2Q8NBJ9 832 aaKnown RBP5.61□□□□□ -1.51
VPS33B-203ENST00000554264 OR52B6Q8NGF0 335 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 OR8J2Q8NGG1 315 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 OR9Q1Q8NGQ5 310 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 PSMA8Q8TAA3 256 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 SCAMP5Q8TAC9 235 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 NDNFQ8TB73 568 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 EEF1AKMT1Q8WVE0 214 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 FBXO32Q969P5 355 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 KIAA1143Q96AT1 154 aaPredicted RBP5.61□□□□□ -1.51
VPS33B-203ENST00000554264 ZNF486Q96H40 463 aaPredicted RBP5.61□□□□□ -1.51
VPS33B-203ENST00000554264 FCRL1Q96LA6 429 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 Q96MT0 163 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 CAMK1GQ96NX5 476 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 AGAP4Q96P64 663 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 MAPKAP1Q9BPZ7 522 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 COPS4Q9BT78 406 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 CDCA4Q9BXL8 241 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 HOXD1Q9GZZ0 328 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 SLC6A15Q9H2J7 730 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 RIBC2Q9H4K1 309 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 ARMC7Q9H6L4 198 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 ZNF556Q9HAH1 456 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 NMUR1Q9HB89 426 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 AASDHPPTQ9NRN7 309 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 TMLHEQ9NVH6 421 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 ING3Q9NXR8 418 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 KCTD5Q9NXV2 234 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 TRPM5Q9NZQ8 1165 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 TBC1D14Q9P2M4 693 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 ERVK-18Q9QC07 812 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 SPASTQ9UBP0 616 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 GIMAP2Q9UG22 337 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 PSORS1C1Q9UIG5 152 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 PHF11Q9UIL8 331 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 BTNL2Q9UIR0 455 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 ZNF490Q9ULM2 529 aaPredicted RBP5.61□□□□□ -1.51
VPS33B-203ENST00000554264 SAMHD1Q9Y3Z3 626 aaKnown RBP5.61□□□□□ -1.51
VPS33B-203ENST00000554264 PCDHGB2Q9Y5G2 931 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 LYVE1Q9Y5Y7 322 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 DGKBQ9Y6T7 804 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 V9GYQ6 96 aa5.61□□□□□ -1.51
VPS33B-203ENST00000554264 CACNA1EQ15878 2313 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 ATG2BQ96BY7 2078 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 LAMA1P25391 3075 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 A0A087WV48 116 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 IGHV1OR15-9A0A0B4J2B8 117 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 TRBV5-4A0A0C4DH59 114 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 A0A1W2PR48 441 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 PMS2P1A4D2B8 440 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 TBC1D3BA6NDS4 549 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 ANTXRLA6NF34 631 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 LRRC14BA6NHZ5 514 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 NCF1BA6NI72 391 aaPredicted RBP5.6□□□□□ -1.51
VPS33B-203ENST00000554264 NCF1CA8MVU1 366 aaPredicted RBP5.6□□□□□ -1.51
VPS33B-203ENST00000554264 TMX2-CTNND1H3BSU7 103 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 QSOX1O00391 747 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 ZW10O43264 779 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 SUV39H1O43463 412 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 ACSL4O60488 711 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 SOCS5O75159 536 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 TOX4O94842 621 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 CER1O95813 267 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 FADS2O95864 444 aaKnown RBP5.6□□□□□ -1.51
VPS33B-203ENST00000554264 CDK1P06493 297 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 RHOCP08134 193 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 HIST1H2AGP0C0S8 130 aaPredicted RBP5.6□□□□□ -1.51
VPS33B-203ENST00000554264 ZDHHC11BP0C7U3 371 aa5.6□□□□□ -1.51
VPS33B-203ENST00000554264 ZNF883P0CG24 379 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms