RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 TRIML2Q8N7C3 387 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 FDCSPQ8NFU4 85 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 OR5AK3PQ8NH89 298 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 RP9Q8TA86 221 aaKnown RBP11.35□□□□□ -0.59
SHMT2-209ENST00000553949 THAP3Q8WTV1 239 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-209ENST00000553949 EXTL1Q92935 676 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 ADIPOR1Q96A54 375 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 GIMAP5Q96F15 307 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 VSTM2LQ96N03 204 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 PHF12Q96QT6 1004 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 NPAS2Q99743 824 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 ITPAQ9BY32 194 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 WWTR1Q9GZV5 400 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 PAIP1Q9H074 479 aaKnown RBP11.35□□□□□ -0.59
SHMT2-209ENST00000553949 LIN28AQ9H9Z2 209 aaKnown RBP11.35□□□□□ -0.59
SHMT2-209ENST00000553949 FOLH1BQ9HBA9 442 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 SLC6A13Q9NSD5 602 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 SLAMF8Q9P0V8 285 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 MYOTQ9UBF9 498 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 ZZEF1O43149 2961 aa11.35□□□□□ -0.59
SHMT2-209ENST00000553949 TPRP12270 2363 aaKnown RBP11.34□□□□□ -0.59
SHMT2-209ENST00000553949 MAN1A2O60476 641 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 ERN1O75460 977 aaKnown RBP11.34□□□□□ -0.59
SHMT2-209ENST00000553949 KCNH1O95259 989 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 HMGN2P05204 90 aaKnown RBP11.34□□□□□ -0.59
SHMT2-209ENST00000553949 ZCCHC18P0CG32 403 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 COX4I1P13073 169 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 SOX11P35716 441 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 CHI3L1P36222 383 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-209ENST00000553949 POLE2P56282 527 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 MLF1P58340 268 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 ZNF155Q12901 538 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-209ENST00000553949 STX5Q13190 355 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 TP53BP2Q13625 1128 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 COL28A1Q2UY09 1125 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 MMEL1Q495T6 779 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 GTDC1Q4AE62 458 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 LRIF1Q5T3J3 769 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 AGAP7PQ5VUJ5 663 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 HLA-DQA1Q5Y7H0 255 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 FAM91A1Q658Y4 838 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 REP15Q6BDI9 236 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 MFSD12Q6NUT3 480 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 C16orf47Q6ZP98 133 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-209ENST00000553949 C6orf120Q7Z4R8 191 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 LGI4Q8N135 537 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 ARMC10Q8N2F6 343 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 DPP10Q8N608 796 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 POU5F2Q8N7G0 328 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 ZNF441Q8N8Z8 693 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 C17orf47Q8NEP4 570 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 CMTM5Q96DZ9 223 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 C16orf58Q96GQ5 468 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 ZNF354BQ96LW1 612 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 AGAP4Q96P64 663 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 BTBD9Q96Q07 612 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 SLC35A5Q9BS91 424 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 CDCP1Q9H5V8 836 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 EPS8L2Q9H6S3 715 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 ZNF552Q9H707 407 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-209ENST00000553949 EQTNQ9NQ60 294 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 GPATCH2Q9NW75 528 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 MAP10Q9P2G4 905 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 TEKT2Q9UIF3 430 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 GPR55Q9Y2T6 319 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-209ENST00000553949 PTPRQQ9UMZ3 2332 aa11.34□□□□□ -0.59
SHMT2-209ENST00000553949 WWP2O00308 870 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 MRASO14807 208 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 OR2J2O76002 312 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 C1QCP02747 245 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 CT45A8P0DMV1 189 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 CT45A9P0DMV2 189 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 HOXB9P17482 250 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-209ENST00000553949 DRD5P21918 477 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 PRDX6P30041 224 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 PPICP45877 212 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 PRIM2P49643 509 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 NR0B1P51843 470 aaKnown RBP11.33□□□□□ -0.6
SHMT2-209ENST00000553949 CORO7P57737 925 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 DCAF7P61962 342 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 NFYCQ13952 458 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 LASP1Q14847 261 aaKnown RBP11.33□□□□□ -0.6
SHMT2-209ENST00000553949 MEP1AQ16819 746 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 CT45A2Q5DJT8 189 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 ACER2Q5QJU3 275 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 SAXO2Q658L1 398 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 ZCCHC12Q6PEW1 402 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 ISLR2Q6UXK2 745 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 DLEU7Q6UYE1 221 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 LINC00696Q6ZRV3 163 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 WDR53Q7Z5U6 358 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-209ENST00000553949 DHDDSQ86SQ9 333 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 CDRT4Q8N9R6 151 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 DNAJB8Q8NHS0 232 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 ZFP90Q8TF47 636 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 HOXB13Q92826 284 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-209ENST00000553949 TP53INP1Q96A56 240 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 RCN3Q96D15 328 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 NEURL3Q96EH8 262 aa11.33□□□□□ -0.6
SHMT2-209ENST00000553949 LCORQ96JN0 433 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms