RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 COQ9O75208 318 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 KIR3DL1P43629 444 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 ZFP36L2P47974 494 aaKnown RBP13.94□□□□□ -0.18
CD9-210ENST00000543916 CYB561P49447 251 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 DGKQP52824 942 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 GYS2P54840 703 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 SRSF11Q05519 484 aaKnown RBP13.94□□□□□ -0.18
CD9-210ENST00000543916 SF3A3Q12874 501 aaKnown RBP eCLIP13.94□□□□□ -0.18
CD9-210ENST00000543916 RPS6KA2Q15349 733 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 DPY19L1Q2PZI1 675 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 FAM174BQ3ZCQ3 159 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 IL20RBQ6UXL0 311 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 TMEM64Q6YI46 380 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 CLECL1Q8IZS7 167 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 CYP4Z2PQ8N1L4 340 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 C17orf47Q8NEP4 570 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 OR9I1Q8NGQ6 314 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 SLC22A8Q8TCC7 542 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 OR5P2Q8WZ92 322 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 VSTM2LQ96N03 204 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 ZNF317Q96PQ6 595 aaPredicted RBP13.94□□□□□ -0.18
CD9-210ENST00000543916 SIKE1Q9BRV8 207 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 TRIM4Q9C037 500 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 CXorf36Q9H7Y0 433 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 TAS2R9Q9NYW1 312 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 CFL2Q9Y281 166 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 PCDHGA10Q9Y5H3 936 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 A0A0G2JND7 137 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 A8MVJ9 347 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 RNASET2O00584 256 aaKnown RBP13.93□□□□□ -0.18
CD9-210ENST00000543916 SLC25A12O75746 678 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 SLC22A3O75751 556 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 TROVE2P10155 538 aaKnown RBP eCLIP13.93□□□□□ -0.18
CD9-210ENST00000543916 S100A3P33764 101 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 PPICP45877 212 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 CORO7P57737 925 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 HBA1P69905 142 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 ZNF155Q12901 538 aaPredicted RBP13.93□□□□□ -0.18
CD9-210ENST00000543916 ZNF791Q3KP31 576 aaPredicted RBP13.93□□□□□ -0.18
CD9-210ENST00000543916 PRR30Q53SZ7 412 aaPredicted RBP13.93□□□□□ -0.18
CD9-210ENST00000543916 ZNF766Q5HY98 468 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 PAOXQ6QHF9 649 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 OPN5Q6U736 354 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 NPSR1Q6W5P4 371 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 MDGA2Q7Z553 956 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 WDR53Q7Z5U6 358 aaPredicted RBP13.93□□□□□ -0.18
CD9-210ENST00000543916 GPALPP1Q8IXQ4 340 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 PRR22Q8IZ63 422 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 SLC15A4Q8N697 577 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 NUP43Q8NFH3 380 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 PSMA8Q8TAA3 256 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 FAM120BQ96EK7 910 aaKnown RBP13.93□□□□□ -0.18
CD9-210ENST00000543916 SCMH1Q96GD3 660 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 LCORQ96JN0 433 aaPredicted RBP13.93□□□□□ -0.18
CD9-210ENST00000543916 BTBD9Q96Q07 612 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 ZBTB18Q99592 522 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 TMEM120AQ9BXJ8 343 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 EPN3Q9H201 632 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 EQTNQ9NQ60 294 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 KLHL1Q9NR64 748 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 HPF1Q9NWY4 346 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 ZIM2Q9NZV7 527 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 NTMQ9P121 344 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 ERVK-11Q9UQG0 969 aa13.93□□□□□ -0.18
CD9-210ENST00000543916 GPR55Q9Y2T6 319 aaPredicted RBP13.93□□□□□ -0.18
CD9-210ENST00000543916 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 FRG2CA6NGY1 282 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 CFLARO15519 480 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 EMC8O43402 210 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 ERN1O75460 977 aaKnown RBP13.92□□□□□ -0.18
CD9-210ENST00000543916 SP1P08047 785 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 ABCB1P08183 1280 aaPredicted RBP13.92□□□□□ -0.18
CD9-210ENST00000543916 FBXO45P0C2W1 286 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 CT45A8P0DMV1 189 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 CT45A9P0DMV2 189 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 DRD5P21918 477 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 MRPL19P49406 292 aaKnown RBP13.92□□□□□ -0.18
CD9-210ENST00000543916 PRKAG1P54619 331 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 DCAF7P61962 342 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 CT45A2Q5DJT8 189 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 SZRD1Q7Z422 152 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 ANKRD46Q86W74 232 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 TAGAPQ8N103 731 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 MIER2Q8N344 545 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 HORMAD2Q8N7B1 307 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 GLB1L3Q8NCI6 653 aaPredicted RBP13.92□□□□□ -0.18
CD9-210ENST00000543916 SPACA9Q96E40 222 aaPredicted RBP13.92□□□□□ -0.18
CD9-210ENST00000543916 GIMAP5Q96F15 307 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 RILPQ96NA2 401 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 C3orf14Q9HBI5 128 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 ZCCHC3Q9NUD5 404 aaKnown RBP13.92□□□□□ -0.18
CD9-210ENST00000543916 MAP10Q9P2G4 905 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 NTNG1Q9Y2I2 539 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 SNX8Q9Y5X2 465 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 NPFFR2Q9Y5X5 522 aa13.92□□□□□ -0.18
CD9-210ENST00000543916 COPG1Q9Y678 874 aaKnown RBP13.92□□□□□ -0.18
CD9-210ENST00000543916 EML6Q6ZMW3 1958 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 PRSS51A0A1B0GVH4 220 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 NME2P1O60361 137 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 PGRP06401 933 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms