RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 EPYCQ99645 322 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 GABARAPL1Q9H0R8 117 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 RBM38Q9H0Z9 239 aaKnown RBP13.23□□□□□ -0.29
ACTN1-205ENST00000538545 SLC38A1Q9H2H9 487 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 CDC14AQ9UNH5 594 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 CHST2Q9Y4C5 530 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 GPC6Q9Y625 555 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-205ENST00000538545 FOXS1O43638 330 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 IFNA14P01570 189 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 GSTT1P30711 240 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 TLX1P31314 330 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-205ENST00000538545 C21orf59P57076 290 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 HNRNPKP61978 463 aaKnown RBP eCLIP13.22□□□□□ -0.29
ACTN1-205ENST00000538545 CDK5R2Q13319 367 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 NNATQ16517 81 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 KCTD21Q4G0X4 260 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 C11orf74Q86VG3 221 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 AQP11Q8NBQ7 271 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 MAFAQ8NHW3 353 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-205ENST00000538545 ALPK1Q96QP1 1244 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 CCDC90BQ9GZT6 254 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 GIN1Q9NXP7 522 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 PHF11Q9UIL8 331 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 FER1L5A0AVI2 2057 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 FAM221BA6H8Z2 402 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 TMEM247A6NEH6 219 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 LMO7DNF2Z398 122 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 PCDHGA12O60330 932 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 PORP16435 677 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-205ENST00000538545 NR4A1P22736 598 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 POU1F1P28069 291 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 IDH2P48735 452 aaKnown RBP13.22□□□□□ -0.29
ACTN1-205ENST00000538545 MLLT1Q03111 559 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-205ENST00000538545 MICAQ29983 383 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 C16orf62Q7Z3J2 963 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 ZNF605Q86T29 641 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 SLC35F3Q8IY50 421 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 TAGAPQ8N103 731 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 CLIP4Q8N3C7 705 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 ADAMTS15Q8TE58 950 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-205ENST00000538545 NPLQ9BXD5 320 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-205ENST00000538545 C3orf14Q9HBI5 128 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 THSD1Q9NS62 852 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 CEPT1Q9Y6K0 416 aa13.22□□□□□ -0.29
ACTN1-205ENST00000538545 RHPN2P1A8MT19 583 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 SLC1A7O00341 560 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 AVPR1BP47901 424 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 BNC1Q01954 994 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 MFSD12Q6NUT3 480 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 FIGNL1Q6PIW4 674 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 TMEM64Q6YI46 380 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 TMEM151BQ8IW70 566 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 ARHGEF39Q8N4T4 335 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 OR56A1Q8NGH5 318 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 ANKRD9Q96BM1 317 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-205ENST00000538545 ZNF354BQ96LW1 612 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 ZNF607Q96SK3 696 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 TSC22D3Q99576 134 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 ANKHQ9HCJ1 492 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 A0A087WXM4 84 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 SLC16A6O15403 523 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 DNAJB5O75953 348 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 ZBTB11O95625 1053 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-205ENST00000538545 ACP2P11117 423 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 DDX5P17844 614 aaKnown RBP13.21□□□□□ -0.29
ACTN1-205ENST00000538545 MAOAP21397 527 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 MLLT3P42568 568 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-205ENST00000538545 NUDT6P53370 316 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 GPR68Q15743 365 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 B3GNT8Q7Z7M8 397 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 CACTIN-AS1Q8N1I8 211 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 DNAJC22Q8N4W6 341 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 CAMKK1Q8N5S9 505 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 ZNF655Q8N720 491 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-205ENST00000538545 MMABQ96EY8 250 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-205ENST00000538545 FAM192AQ9GZU8 254 aa13.21□□□□□ -0.29
ACTN1-205ENST00000538545 DNAAF2Q9NVR5 837 aaKnown RBP13.21□□□□□ -0.29
ACTN1-205ENST00000538545 A8MVJ9 347 aa13.21□□□□□ -0.3
ACTN1-205ENST00000538545 GIMD1P0DJR0 217 aa13.21□□□□□ -0.3
ACTN1-205ENST00000538545 RHCEP18577 417 aa13.21□□□□□ -0.3
ACTN1-205ENST00000538545 NUDT1P36639 197 aa13.21□□□□□ -0.3
ACTN1-205ENST00000538545 ALDH3B2P48448 385 aa13.21□□□□□ -0.3
ACTN1-205ENST00000538545 AFF3P51826 1226 aaKnown RBP13.21□□□□□ -0.3
ACTN1-205ENST00000538545 SLC13A2Q13183 592 aa13.21□□□□□ -0.3
ACTN1-205ENST00000538545 C14orf28Q4W4Y0 310 aa13.21□□□□□ -0.3
ACTN1-205ENST00000538545 ZAR1Q86SH2 424 aa13.21□□□□□ -0.3
ACTN1-205ENST00000538545 ZBTB46Q86UZ6 589 aa13.21□□□□□ -0.3
ACTN1-205ENST00000538545 SLC7A13Q8TCU3 470 aa13.21□□□□□ -0.3
ACTN1-205ENST00000538545 RDH12Q96NR8 316 aa13.21□□□□□ -0.3
ACTN1-205ENST00000538545 FANCEQ9HB96 536 aa13.21□□□□□ -0.3
ACTN1-205ENST00000538545 SLC24A3Q9HC58 644 aa13.21□□□□□ -0.3
ACTN1-205ENST00000538545 DHCR7Q9UBM7 475 aaKnown RBP13.21□□□□□ -0.3
ACTN1-205ENST00000538545 PCDHGA6Q9Y5G7 932 aa13.21□□□□□ -0.3
ACTN1-205ENST00000538545 BCAS1O75363 584 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-205ENST00000538545 SERPINB7O75635 380 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 ANGPTL1O95841 491 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 ALAS2P22557 587 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 OR1D4P47884 311 aa13.2□□□□□ -0.3
ACTN1-205ENST00000538545 RGS19P49795 217 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms