RNA–Protein interactions for RNA: ENST00000532560.5

CPSF1-208, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-208ENST00000532560 ZIC2O95409 532 aaPredicted RBP13.87□□□□□ -0.19
CPSF1-208ENST00000532560 CCL3P10147 92 aa13.87□□□□□ -0.19
CPSF1-208ENST00000532560 ZNF24P17028 368 aa13.87□□□□□ -0.19
CPSF1-208ENST00000532560 DDX5P17844 614 aaKnown RBP13.87□□□□□ -0.19
CPSF1-208ENST00000532560 MST1P26927 711 aa13.87□□□□□ -0.19
CPSF1-208ENST00000532560 HPCAL1P37235 193 aa13.87□□□□□ -0.19
CPSF1-208ENST00000532560 RPL3P39023 403 aaKnown RBP13.87□□□□□ -0.19
CPSF1-208ENST00000532560 FRKP42685 505 aaPredicted RBP13.87□□□□□ -0.19
CPSF1-208ENST00000532560 TMED10P49755 219 aaKnown RBP13.87□□□□□ -0.19
CPSF1-208ENST00000532560 MEOX1P50221 254 aa13.87□□□□□ -0.19
CPSF1-208ENST00000532560 NR0B1P51843 470 aaKnown RBP13.87□□□□□ -0.19
CPSF1-208ENST00000532560 NRG3P56975 720 aa13.87□□□□□ -0.19
CPSF1-208ENST00000532560 DCAF7P61962 342 aa13.87□□□□□ -0.19
CPSF1-208ENST00000532560 EMX2Q04743 252 aa13.87□□□□□ -0.19
CPSF1-208ENST00000532560 NTRK2Q16620 822 aa13.87□□□□□ -0.19
CPSF1-208ENST00000532560 ZNF385BQ569K4 471 aa13.87□□□□□ -0.19
CPSF1-208ENST00000532560 C6orf89Q6UWU4 347 aa13.87□□□□□ -0.19
CPSF1-208ENST00000532560 R3HCC1LQ7Z5L2 792 aaKnown RBP13.87□□□□□ -0.19
CPSF1-208ENST00000532560 SIAH3Q8IW03 269 aa13.87□□□□□ -0.19
CPSF1-208ENST00000532560 ANKS4BQ8N8V4 417 aa13.87□□□□□ -0.19
CPSF1-208ENST00000532560 ZFP62Q8NB50 900 aaPredicted RBP13.87□□□□□ -0.19
CPSF1-208ENST00000532560 SIMC1Q8NDZ2 872 aa13.87□□□□□ -0.19
CPSF1-208ENST00000532560 OR7G2Q8NG99 324 aa13.87□□□□□ -0.19
CPSF1-208ENST00000532560 PAQR8Q8TEZ7 354 aa13.87□□□□□ -0.19
CPSF1-208ENST00000532560 NXF5Q9H1B4 397 aaKnown RBP13.87□□□□□ -0.19
CPSF1-208ENST00000532560 MANSC1Q9H8J5 431 aa13.87□□□□□ -0.19
CPSF1-208ENST00000532560 MEAF6Q9HAF1 191 aa13.87□□□□□ -0.19
CPSF1-208ENST00000532560 SACM1LQ9NTJ5 587 aa13.87□□□□□ -0.19
CPSF1-208ENST00000532560 DEPPQ9NTK1 212 aa13.87□□□□□ -0.19
CPSF1-208ENST00000532560 EIF3LQ9Y262 564 aaKnown RBP13.87□□□□□ -0.19
CPSF1-208ENST00000532560 RP1L1Q8IWN7 2480 aaPredicted RBP13.86□□□□□ -0.19
CPSF1-208ENST00000532560 CLEC18AA5D8T8 446 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 FRG2CA6NGY1 282 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 CAPN14A8MX76 684 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 ACOX3O15254 700 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 COQ9O75208 318 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 MC3RP41968 323 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 C21orf58P58505 322 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 GPR85P60893 370 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 OCRLQ01968 901 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 ALDH6A1Q02252 535 aaKnown RBP13.86□□□□□ -0.19
CPSF1-208ENST00000532560 ELOAQ14241 798 aaKnown RBP13.86□□□□□ -0.19
CPSF1-208ENST00000532560 ESPL1Q14674 2120 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 PTGR1Q14914 329 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 RPS6KA2Q15349 733 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 IL23RQ5VWK5 629 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 ANKRD26P1Q6NSI1 321 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 CLEC18BQ6UXF7 455 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 CPLX4Q7Z7G2 160 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 OR2L13Q8N349 312 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 CLEC18CQ8NCF0 446 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 OR10G3Q8NGC4 313 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 ZFP28Q8NHY6 868 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 CIDECQ96AQ7 238 aaPredicted RBP13.86□□□□□ -0.19
CPSF1-208ENST00000532560 HSPBAP1Q96EW2 488 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 ZBED6CLQ96FA7 236 aaPredicted RBP13.86□□□□□ -0.19
CPSF1-208ENST00000532560 LCORQ96JN0 433 aaPredicted RBP13.86□□□□□ -0.19
CPSF1-208ENST00000532560 VSTM2LQ96N03 204 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 BTBD9Q96Q07 612 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 NUF2Q9BZD4 464 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 AKTIPQ9H8T0 292 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 ACSS1Q9NUB1 689 aaPredicted RBP13.86□□□□□ -0.19
CPSF1-208ENST00000532560 INTS9Q9NV88 658 aaKnown RBP13.86□□□□□ -0.19
CPSF1-208ENST00000532560 PNPOQ9NVS9 261 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 NOP53Q9NZM5 478 aaKnown RBP13.86□□□□□ -0.19
CPSF1-208ENST00000532560 SH3BP4Q9P0V3 963 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 ATP6V1HQ9UI12 483 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 NPFFR2Q9Y5X5 522 aa13.86□□□□□ -0.19
CPSF1-208ENST00000532560 CHCHD2Q9Y6H1 151 aaPredicted RBP13.86□□□□□ -0.19
CPSF1-208ENST00000532560 A0A0G2JMM0 328 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 A0A1W2PPB8 328 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 A0A1W2PRS3 328 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 KIR3DP1A8MWS1 328 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 TO15178 435 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 PSMG1O95456 288 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 P04436 131 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 PRPS1L1P21108 318 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 DRD4P21917 467 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 DRD5P21918 477 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 PPICP45877 212 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 SEC24CP53992 1094 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 PSPHP78330 225 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 RNFT1Q5M7Z0 435 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 SLC22A10Q63ZE4 541 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 TMEM107Q6UX40 140 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 GK5Q6ZS86 529 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 CCDC121Q6ZUS5 278 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 FBXW8Q8N3Y1 598 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 FAM13CQ8NE31 585 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 OR2M7Q8NG81 312 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 PPP1R36Q96LQ0 422 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 GPR137Q96N19 417 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 FAM173AQ9BQD7 235 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 ANKRA2Q9H9E1 313 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 FOLH1BQ9HBA9 442 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 DDX18Q9NVP1 670 aaKnown RBP13.85□□□□□ -0.19
CPSF1-208ENST00000532560 TAS2R9Q9NYW1 312 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 CNIH4Q9P003 139 aa13.85□□□□□ -0.19
CPSF1-208ENST00000532560 C19orf53Q9UNZ5 99 aaPredicted RBP13.85□□□□□ -0.19
CPSF1-208ENST00000532560 GPR55Q9Y2T6 319 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms