RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 KANK2Q63ZY3 851 aa9.77□□□□□ -0.85
CD44-227ENST00000528086 FAM47EQ6ZV65 393 aa9.77□□□□□ -0.85
CD44-227ENST00000528086 TICAM1Q8IUC6 712 aa9.77□□□□□ -0.85
CD44-227ENST00000528086 RIBC1Q8N443 379 aaPredicted RBP9.77□□□□□ -0.85
CD44-227ENST00000528086 FAM109AQ8N4B1 249 aa9.77□□□□□ -0.85
CD44-227ENST00000528086 FAM13CQ8NE31 585 aa9.77□□□□□ -0.85
CD44-227ENST00000528086 OR4N2Q8NGD1 307 aa9.77□□□□□ -0.85
CD44-227ENST00000528086 SLC22A8Q8TCC7 542 aa9.77□□□□□ -0.85
CD44-227ENST00000528086 RNF138Q8WVD3 245 aa9.77□□□□□ -0.85
CD44-227ENST00000528086 MAGED4Q96JG8 741 aa9.77□□□□□ -0.85
CD44-227ENST00000528086 ANGPTL4Q9BY76 406 aa9.77□□□□□ -0.85
CD44-227ENST00000528086 ROPN1BQ9BZX4 212 aaPredicted RBP9.77□□□□□ -0.85
CD44-227ENST00000528086 C20orf27Q9GZN8 174 aa9.77□□□□□ -0.85
CD44-227ENST00000528086 ROPN1Q9HAT0 212 aaPredicted RBP9.77□□□□□ -0.85
CD44-227ENST00000528086 MYNNQ9NPC7 610 aa9.77□□□□□ -0.85
CD44-227ENST00000528086 PNPLA3Q9NST1 481 aa9.77□□□□□ -0.85
CD44-227ENST00000528086 STK38LQ9Y2H1 464 aa9.77□□□□□ -0.85
CD44-227ENST00000528086 GPR55Q9Y2T6 319 aaPredicted RBP9.77□□□□□ -0.85
CD44-227ENST00000528086 FAM215AQ9Y5M1 114 aa9.77□□□□□ -0.85
CD44-227ENST00000528086 TACC2O95359 2948 aa9.77□□□□□ -0.85
CD44-227ENST00000528086 ATP6AP2A0A1C7CYW4 349 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 GNG14A0A1W2PPG7 69 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 C2orf72A6NCS6 295 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 NPIPA2E9PIF3 369 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 E9PLN8 166 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 NPIPA3F8WFD2 350 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 AZIN1O14977 448 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 LSM1O15116 133 aaKnown RBP9.76□□□□□ -0.85
CD44-227ENST00000528086 TO15178 435 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 ITM2AO43736 263 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 PLOD3O60568 738 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 GUCY1B2O75343 617 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 PPM1BO75688 479 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 ATP6AP2O75787 350 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 P04436 131 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 JUNP05412 331 aaKnown RBP9.76□□□□□ -0.85
CD44-227ENST00000528086 BPGMP07738 259 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 LINC00032P0C843 101 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 DHRS4L1P0CG22 281 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 ABOP16442 354 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 SDC1P18827 310 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 CASP3P42574 277 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 PPICP45877 212 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 PER3P56645 1201 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 RBPJQ06330 500 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 ZNF763Q0D2J5 394 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 C2orf80Q0P641 193 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 RPS6KA2Q15349 733 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 ZNF630Q2M218 657 aaPredicted RBP9.76□□□□□ -0.85
CD44-227ENST00000528086 GXYLT1Q4G148 440 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 XKR7Q5GH72 579 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 SPDYAQ5MJ70 313 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 SP5Q6BEB4 398 aaPredicted RBP9.76□□□□□ -0.85
CD44-227ENST00000528086 ANKRD26P1Q6NSI1 321 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 GK5Q6ZS86 529 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 SEM1Q6ZVN7 128 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 EXOC3L1Q86VI1 746 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 CNPY4Q8N129 248 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 ZNF808Q8N4W9 903 aaPredicted RBP9.76□□□□□ -0.85
CD44-227ENST00000528086 CCDC63Q8NA47 563 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 PHF10Q8WUB8 498 aaKnown RBP9.76□□□□□ -0.85
CD44-227ENST00000528086 OMA1Q96E52 524 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 LCORQ96JN0 433 aaPredicted RBP9.76□□□□□ -0.85
CD44-227ENST00000528086 BTBD9Q96Q07 612 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 VKORC1Q9BQB6 163 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 FAIM2Q9BWQ8 316 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 RTN4RQ9BZR6 473 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 SLC6A15Q9H2J7 730 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 GLIPR2Q9H4G4 154 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 GALNT9Q9HCQ5 603 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 ZFP64Q9NPA5 681 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.76□□□□□ -0.85
CD44-227ENST00000528086 NMRK1Q9NWW6 199 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 EHD3Q9NZN3 535 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 CNIH4Q9P003 139 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 BCAP29Q9UHQ4 241 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 BAIAP2L1Q9UHR4 511 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 ZDHHC2Q9UIJ5 367 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 DOCK7Q96N67 2140 aa9.76□□□□□ -0.85
CD44-227ENST00000528086 AKAP9Q99996 3911 aa9.75□□□□□ -0.85
CD44-227ENST00000528086 GOLGA6L10A6NI86 522 aa9.75□□□□□ -0.85
CD44-227ENST00000528086 UPK1AO00322 258 aa9.75□□□□□ -0.85
CD44-227ENST00000528086 DYRK3O43781 588 aa9.75□□□□□ -0.85
CD44-227ENST00000528086 NPHS1O60500 1241 aa9.75□□□□□ -0.85
CD44-227ENST00000528086 TSPAN2O60636 221 aa9.75□□□□□ -0.85
CD44-227ENST00000528086 LYPLA1O75608 230 aaPredicted RBP9.75□□□□□ -0.85
CD44-227ENST00000528086 TPOP07202 933 aa9.75□□□□□ -0.85
CD44-227ENST00000528086 DRD5P21918 477 aa9.75□□□□□ -0.85
CD44-227ENST00000528086 DEKP35659 375 aaKnown RBP9.75□□□□□ -0.85
CD44-227ENST00000528086 MAP3K8P41279 467 aa9.75□□□□□ -0.85
CD44-227ENST00000528086 GAS1P54826 345 aa9.75□□□□□ -0.85
CD44-227ENST00000528086 NUP107P57740 925 aa9.75□□□□□ -0.85
CD44-227ENST00000528086 NAA20P61599 178 aa9.75□□□□□ -0.85
CD44-227ENST00000528086 PSG6Q00889 435 aa9.75□□□□□ -0.85
CD44-227ENST00000528086 PLGLB1Q02325 96 aa9.75□□□□□ -0.85
CD44-227ENST00000528086 TFF3Q07654 80 aa9.75□□□□□ -0.85
CD44-227ENST00000528086 PDE7AQ13946 482 aa9.75□□□□□ -0.85
CD44-227ENST00000528086 CFAP157Q5JU67 520 aa9.75□□□□□ -0.85
CD44-227ENST00000528086 EXOSC6Q5RKV6 272 aaKnown RBP9.75□□□□□ -0.85
CD44-227ENST00000528086 DCST1Q5T197 706 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms