RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 FITM2Q8N6M3 262 aa16.05■□□□□ 0.16
CCS-204ENST00000526066 RP9Q8TA86 221 aaKnown RBP16.05■□□□□ 0.16
CCS-204ENST00000526066 ZNF675Q8TD23 568 aa16.05■□□□□ 0.16
CCS-204ENST00000526066 CCDC115Q96NT0 180 aa16.05■□□□□ 0.16
CCS-204ENST00000526066 GLIPR2Q9H4G4 154 aa16.05■□□□□ 0.16
CCS-204ENST00000526066 RMND5AQ9H871 391 aa16.05■□□□□ 0.16
CCS-204ENST00000526066 SUCOQ9UBS9 1254 aaKnown RBP16.05■□□□□ 0.16
CCS-204ENST00000526066 CSAG2Q9Y5P2 127 aa16.05■□□□□ 0.16
CCS-204ENST00000526066 HS3ST3B1Q9Y662 390 aa16.05■□□□□ 0.16
CCS-204ENST00000526066 C2CD3Q4AC94 2353 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 CNTRLQ7Z7A1 2325 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 BBIP1A8MTZ0 92 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 IFNA16P05015 189 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 CD1EP15812 388 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 NCBP2P52298 156 aaKnown RBP eCLIP16.04■□□□□ 0.167e-7■□□□□ 10.9
CCS-204ENST00000526066 MANFP55145 182 aaKnown RBP16.04■□□□□ 0.16
CCS-204ENST00000526066 OR4D2P58180 307 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 STX5Q13190 355 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 CYLC2Q14093 348 aaPredicted RBP16.04■□□□□ 0.16
CCS-204ENST00000526066 KRT72Q14CN4 511 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 MAPKAPK3Q16644 382 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 SPRED3Q2MJR0 410 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 VPS26BQ4G0F5 336 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 IGFL2Q6UWQ7 119 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 LANCL3Q6ZV70 420 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 TRPM8Q7Z2W7 1104 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 CPEB2Q7Z5Q1 589 aaKnown RBP16.04■□□□□ 0.16
CCS-204ENST00000526066 PSMA8Q8TAA3 256 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 VPS33AQ96AX1 596 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 CMTM5Q96DZ9 223 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 THOC3Q96J01 351 aaKnown RBP16.04■□□□□ 0.16
CCS-204ENST00000526066 CXorf21Q9HAI6 301 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 NEUROD4Q9HD90 331 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 NDUFAF1Q9Y375 327 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 DOCK10Q96BY6 2186 aa16.04■□□□□ 0.16
CCS-204ENST00000526066 ASPDHA6ND91 283 aa16.03■□□□□ 0.16
CCS-204ENST00000526066 ANGPT2O15123 496 aa16.03■□□□□ 0.16
CCS-204ENST00000526066 STSP08842 583 aa16.03■□□□□ 0.16
CCS-204ENST00000526066 COX4I1P13073 169 aa16.03■□□□□ 0.16
CCS-204ENST00000526066 POU3F2P20265 443 aaPredicted RBP16.03■□□□□ 0.16
CCS-204ENST00000526066 TRPC1P48995 793 aa16.03■□□□□ 0.16
CCS-204ENST00000526066 ARG2P78540 354 aa16.03■□□□□ 0.16
CCS-204ENST00000526066 GABPB1Q06547 395 aaPredicted RBP16.03■□□□□ 0.16
CCS-204ENST00000526066 MAP4K2Q12851 820 aa16.03■□□□□ 0.16
CCS-204ENST00000526066 PRICKLE4Q2TBC4 344 aa16.03■□□□□ 0.16
CCS-204ENST00000526066 SFT2D3Q587I9 215 aa16.03■□□□□ 0.16
CCS-204ENST00000526066 FAAH2Q6GMR7 532 aa16.03■□□□□ 0.16
CCS-204ENST00000526066 LINC00696Q6ZRV3 163 aa16.03■□□□□ 0.16
CCS-204ENST00000526066 SNX32Q86XE0 403 aa16.03■□□□□ 0.16
CCS-204ENST00000526066 OR14A16Q8NHC5 309 aa16.03■□□□□ 0.16
CCS-204ENST00000526066 GOT1L1Q8NHS2 421 aaPredicted RBP16.03■□□□□ 0.16
CCS-204ENST00000526066 GTF2H4Q92759 462 aa16.03■□□□□ 0.16
CCS-204ENST00000526066 DAZLQ92904 295 aaKnown RBP16.03■□□□□ 0.16
CCS-204ENST00000526066 RIT1Q92963 219 aa16.03■□□□□ 0.16
CCS-204ENST00000526066 CTHRC1Q96CG8 243 aa16.03■□□□□ 0.16
CCS-204ENST00000526066 ITCHQ96J02 903 aa16.03■□□□□ 0.16
CCS-204ENST00000526066 ZNF700Q9H0M5 742 aa16.03■□□□□ 0.16
CCS-204ENST00000526066 SERHLQ9NQF3 203 aa16.03■□□□□ 0.16
CCS-204ENST00000526066 PNO1Q9NRX1 252 aaKnown RBP16.03■□□□□ 0.16
CCS-204ENST00000526066 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.03■□□□□ 0.16
CCS-204ENST00000526066 LEF1Q9UJU2 399 aaPredicted RBP16.03■□□□□ 0.16
CCS-204ENST00000526066 PCDHGB4Q9UN71 923 aa16.03■□□□□ 0.16
CCS-204ENST00000526066 MYOCOSA0A1B0GUC4 107 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 PLOD2O00469 737 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 SOCS6O14544 535 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 DYRK3O43781 588 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 C6orf47O95873 294 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 PRF1P14222 555 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 EFNA1P20827 205 aaPredicted RBP16.02■□□□□ 0.16
CCS-204ENST00000526066 NT5EP21589 574 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 HBA1P69905 142 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 MGAT2Q10469 447 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 MFAP5Q13361 173 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 ZNF628Q5EBL2 1059 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 MTFR2Q6P444 385 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 KIRREL2Q6UWL6 708 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 ZNF551Q7Z340 670 aaPredicted RBP16.02■□□□□ 0.16
CCS-204ENST00000526066 GDF7Q7Z4P5 450 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 ANKRD46Q86W74 232 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 GALNT12Q8IXK2 581 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 CLECL1Q8IZS7 167 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 DPP10Q8N608 796 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 OR1N1Q8NGS0 311 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 OR9A2Q8NGT5 310 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 DNAJB8Q8NHS0 232 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 PTPMT1Q8WUK0 201 aaPredicted RBP16.02■□□□□ 0.16
CCS-204ENST00000526066 PPWD1Q96BP3 646 aaKnown RBP16.02■□□□□ 0.16
CCS-204ENST00000526066 FBXL20Q96IG2 436 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 LPAR4Q99677 370 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 SLX1AQ9BQ83 275 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 TAS2R9Q9NYW1 312 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 MAT2BQ9NZL9 334 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 PPIEQ9UNP9 301 aaKnown RBP16.02■□□□□ 0.16
CCS-204ENST00000526066 CLCA3PQ9Y6N3 262 aa16.02■□□□□ 0.16
CCS-204ENST00000526066 A0A087WV62 115 aa16.01■□□□□ 0.15
CCS-204ENST00000526066 IGHV1-45A0A0A0MS14 117 aa16.01■□□□□ 0.15
CCS-204ENST00000526066 LOC100653049A0A140TA62 436 aa16.01■□□□□ 0.15
CCS-204ENST00000526066 C17orf105B2RV13 164 aa16.01■□□□□ 0.15
CCS-204ENST00000526066 RFXANKO14593 260 aa16.01■□□□□ 0.15
CCS-204ENST00000526066 PLOD3O60568 738 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms