RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 ERVK-18Q9QC07 812 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 A4GNTQ9UNA3 340 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 PCDHGB1Q9Y5G3 927 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 DSPPQ9NZW4 1301 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 FAM227AF5H4B4 570 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 CASC3O15234 703 aaKnown RBP24.26■■□□□ 1.47
COL13A1-214ENST00000522165 SEC23BQ15437 767 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 ATAD3BQ5T9A4 648 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 CA13Q8N1Q1 262 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 MUL1Q969V5 352 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 NELL2Q99435 816 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 PINK1Q9BXM7 581 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 CCDC90BQ9GZT6 254 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 CALML5Q9NZT1 146 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 PTGFRNQ9P2B2 879 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 ENOPH1Q9UHY7 261 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 ITIH1P19827 911 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 SOX18P35713 384 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 SMIM11AP58511 58 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 ID2Q02363 134 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 RPL6Q02878 288 aaKnown RBP24.25■■□□□ 1.47
COL13A1-214ENST00000522165 NPTX1Q15818 432 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 DCST1Q5T197 706 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 CDC73Q6P1J9 531 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 KLHL35Q6PF15 583 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 WDR53Q7Z5U6 358 aaPredicted RBP24.25■■□□□ 1.47
COL13A1-214ENST00000522165 SIX5Q8N196 739 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 TMEM52Q8NDY8 209 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 FAM81AQ8TBF8 368 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 ADAMTS15Q8TE58 950 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 FUZQ9BT04 418 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 QRSL1Q9H0R6 528 aaKnown RBP24.25■■□□□ 1.47
COL13A1-214ENST00000522165 DNAAF2Q9NVR5 837 aaKnown RBP24.25■■□□□ 1.47
COL13A1-214ENST00000522165 DUXAA6NLW8 204 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 FAAHO00519 579 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 FAM20BO75063 409 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 OXSR1O95747 527 aaPredicted RBP24.25■■□□□ 1.47
COL13A1-214ENST00000522165 SHC2P98077 582 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 CHRNEQ04844 493 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 DEFB110Q30KQ9 67 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 FAM214AQ32MH5 1076 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 ZNF628Q5EBL2 1059 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 CWF19L1Q69YN2 538 aaKnown RBP24.25■■□□□ 1.47
COL13A1-214ENST00000522165 HEPHL1Q6MZM0 1159 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 KLHL17Q6TDP4 642 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 C16orf62Q7Z3J2 963 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 SLC16A11Q8NCK7 471 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 NAA50Q9GZZ1 169 aaKnown RBP24.25■■□□□ 1.47
COL13A1-214ENST00000522165 MIR1-1HGQ9H1L0 117 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 UCK1Q9HA47 277 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 DOLKQ9UPQ8 538 aa24.25■■□□□ 1.47
COL13A1-214ENST00000522165 FGF17O60258 216 aa24.24■■□□□ 1.47
COL13A1-214ENST00000522165 PIN1Q13526 163 aaPredicted RBP24.24■■□□□ 1.47
COL13A1-214ENST00000522165 ARHGEF39Q8N4T4 335 aa24.24■■□□□ 1.47
COL13A1-214ENST00000522165 ZNF540Q8NDQ6 660 aa24.24■■□□□ 1.47
COL13A1-214ENST00000522165 SIMC1Q8NDZ2 872 aa24.24■■□□□ 1.47
COL13A1-214ENST00000522165 OR6T1Q8NGN1 323 aa24.24■■□□□ 1.47
COL13A1-214ENST00000522165 RHOXF1Q8NHV9 184 aa24.24■■□□□ 1.47
COL13A1-214ENST00000522165 TMEM9Q9P0T7 183 aa24.24■■□□□ 1.47
COL13A1-214ENST00000522165 COLQQ9Y215 455 aaPredicted RBP24.24■■□□□ 1.47
COL13A1-214ENST00000522165 SLC9B1P1A6NJY1 282 aa24.23■■□□□ 1.47
COL13A1-214ENST00000522165 H3BMQ9 156 aa24.23■■□□□ 1.47
COL13A1-214ENST00000522165 LDB3O75112 727 aa24.23■■□□□ 1.47
COL13A1-214ENST00000522165 ADAP00813 363 aa24.23■■□□□ 1.47
COL13A1-214ENST00000522165 CTSBP07858 339 aa24.23■■□□□ 1.47
COL13A1-214ENST00000522165 CSNK2BP67870 215 aa24.23■■□□□ 1.47
COL13A1-214ENST00000522165 EMX1Q04741 257 aaPredicted RBP24.23■■□□□ 1.47
COL13A1-214ENST00000522165 MCATQ8IVS2 390 aaKnown RBP24.23■■□□□ 1.47
COL13A1-214ENST00000522165 SPEM1Q8N4L4 309 aa24.23■■□□□ 1.47
COL13A1-214ENST00000522165 COG8Q96MW5 612 aa24.23■■□□□ 1.47
COL13A1-214ENST00000522165 RHNO1Q9BSD3 238 aa24.23■■□□□ 1.47
COL13A1-214ENST00000522165 SGK494L7N484 410 aa24.23■■□□□ 1.47
COL13A1-214ENST00000522165 UGT2B17O75795 530 aa24.23■■□□□ 1.47
COL13A1-214ENST00000522165 GPR75O95800 540 aa24.23■■□□□ 1.47
COL13A1-214ENST00000522165 ATP1B1P05026 303 aa24.23■■□□□ 1.47
COL13A1-214ENST00000522165 ALPPP05187 535 aa24.23■■□□□ 1.47
COL13A1-214ENST00000522165 CAPZBP47756 277 aa24.23■■□□□ 1.47
COL13A1-214ENST00000522165 FHL5Q5TD97 284 aa24.23■■□□□ 1.47
COL13A1-214ENST00000522165 TANKQ92844 425 aa24.23■■□□□ 1.47
COL13A1-214ENST00000522165 CCNB1IP1Q9NPC3 277 aa24.23■■□□□ 1.47
COL13A1-214ENST00000522165 C19orf53Q9UNZ5 99 aaPredicted RBP24.23■■□□□ 1.47
COL13A1-214ENST00000522165 MGAT4BQ9UQ53 548 aa24.23■■□□□ 1.47
COL13A1-214ENST00000522165 PCDHGA10Q9Y5H3 936 aa24.23■■□□□ 1.47
COL13A1-214ENST00000522165 A0A1W2PRQ8 180 aa24.22■■□□□ 1.47
COL13A1-214ENST00000522165 SYT5O00445 386 aa24.22■■□□□ 1.47
COL13A1-214ENST00000522165 ZIC2O95409 532 aaPredicted RBP24.22■■□□□ 1.47
COL13A1-214ENST00000522165 AGR2O95994 175 aa24.22■■□□□ 1.47
COL13A1-214ENST00000522165 IDH2P48735 452 aaKnown RBP24.22■■□□□ 1.47
COL13A1-214ENST00000522165 DGCR6Q14129 220 aa24.22■■□□□ 1.47
COL13A1-214ENST00000522165 TRMT12Q53H54 448 aaKnown RBP24.22■■□□□ 1.47
COL13A1-214ENST00000522165 ZNF311Q5JNZ3 666 aa24.22■■□□□ 1.47
COL13A1-214ENST00000522165 SLC7A13Q8TCU3 470 aa24.22■■□□□ 1.47
COL13A1-214ENST00000522165 IPCEF1Q8WWN9 437 aaPredicted RBP24.22■■□□□ 1.47
COL13A1-214ENST00000522165 ZG16BQ96DA0 208 aa24.22■■□□□ 1.47
COL13A1-214ENST00000522165 HSPA12BQ96MM6 686 aa24.22■■□□□ 1.47
COL13A1-214ENST00000522165 FTSJ1Q9UET6 329 aa24.22■■□□□ 1.47
COL13A1-214ENST00000522165 LILRA5A6NI73 299 aa24.22■■□□□ 1.47
COL13A1-214ENST00000522165 MRPS14O60783 128 aaKnown RBP24.22■■□□□ 1.47
COL13A1-214ENST00000522165 PROS1P07225 676 aa24.22■■□□□ 1.47
COL13A1-214ENST00000522165 PDX1P52945 283 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms