RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 KLHL42Q9P2K6 505 aa5.31□□□□□ -1.56
GYPB-215ENST00000513677 SLC17A6Q9P2U8 582 aa5.31□□□□□ -1.56
GYPB-215ENST00000513677 BOKQ9UMX3 212 aaPredicted RBP5.31□□□□□ -1.56
GYPB-215ENST00000513677 SLC22A14Q9Y267 594 aa5.31□□□□□ -1.56
GYPB-215ENST00000513677 ATG4BQ9Y4P1 393 aa5.31□□□□□ -1.56
GYPB-215ENST00000513677 VPS13CQ709C8 3753 aa5.31□□□□□ -1.56
GYPB-215ENST00000513677 ZCWPW2A0A1B0GU75 182 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 TRIM64A6NGJ6 449 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 ANKDD1BA6NHY2 528 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 TRIM64BA6NI03 449 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 FAM171A2A8MVW0 826 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 EIF3FO00303 357 aaPredicted RBP5.3□□□□□ -1.56
GYPB-215ENST00000513677 CASKO14936 926 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 ARHGEF9O43307 516 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 HCN1O60741 890 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 SMPD2O60906 423 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 H2AFYO75367 372 aaKnown RBP5.3□□□□□ -1.56
GYPB-215ENST00000513677 WDR47O94967 919 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 ACSL3O95573 720 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 KRT14P02533 472 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 SERPINA6P08185 405 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 SMIM10L1P0DMW3 83 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 CXCR5P32302 372 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 LSP1P33241 339 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 PEX19P40855 299 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 GDF5P43026 501 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 MSH2P43246 934 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 ZNF75DP51815 510 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 HSD17B7P56937 341 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 RAC3P60763 192 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 PHC1P78364 1004 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 TIAL1Q01085 375 aaKnown RBP eCLIP5.3□□□□□ -1.56
GYPB-215ENST00000513677 FOXO1Q12778 655 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 SIX1Q15475 284 aaPredicted RBP5.3□□□□□ -1.56
GYPB-215ENST00000513677 TERF2Q15554 542 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 C18orf21Q32NC0 220 aaPredicted RBP5.3□□□□□ -1.56
GYPB-215ENST00000513677 SHEQ5VZ18 495 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 SLC22A10Q63ZE4 541 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 TRIM40Q6P9F5 258 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 PLXDC2Q6UX71 529 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 TMEM64Q6YI46 380 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 STRA8Q7Z7C7 330 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 OR4N5Q8IXE1 308 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 ZNF595Q8IYB9 648 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 TXLNBQ8N3L3 684 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 FBXW8Q8N3Y1 598 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 MORN4Q8NDC4 146 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 OR5L2Q8NGL0 311 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 GABPB2Q8TAK5 448 aaPredicted RBP5.3□□□□□ -1.56
GYPB-215ENST00000513677 NEIL3Q8TAT5 605 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 SLC22A8Q8TCC7 542 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 PTPMT1Q8WUK0 201 aaPredicted RBP5.3□□□□□ -1.56
GYPB-215ENST00000513677 PPWD1Q96BP3 646 aaKnown RBP5.3□□□□□ -1.56
GYPB-215ENST00000513677 FBXL8Q96CD0 374 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 MS4A6EQ96DS6 147 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 HSPBAP1Q96EW2 488 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 NEIL1Q96FI4 390 aaPredicted RBP5.3□□□□□ -1.56
GYPB-215ENST00000513677 PERPQ96FX8 193 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 SMIM10Q96HG1 83 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 GNRHR2Q96P88 292 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 GAL3ST4Q96RP7 486 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 DOHHQ9BU89 302 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 SARGQ9BW04 601 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 OR10A2Q9H208 303 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 ZNF703Q9H7S9 590 aaPredicted RBP5.3□□□□□ -1.56
GYPB-215ENST00000513677 PLEKHF2Q9H8W4 249 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 SEC61A2Q9H9S3 476 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 UBTD1Q9HAC8 227 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 PELI2Q9HAT8 420 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 PPANQ9NQ55 473 aaKnown RBP5.3□□□□□ -1.56
GYPB-215ENST00000513677 COPS7AQ9UBW8 275 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 EIF3LQ9Y262 564 aaKnown RBP5.3□□□□□ -1.56
GYPB-215ENST00000513677 SLC6A5Q9Y345 797 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 MPDZO75970 2070 aa5.3□□□□□ -1.56
GYPB-215ENST00000513677 NSD1Q96L73 2696 aaPredicted RBP5.3□□□□□ -1.56
GYPB-215ENST00000513677 FREM3P0C091 2139 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 A0A088AWK7 358 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 MAGEB16A2A368 324 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 NCF1BA6NI72 391 aaPredicted RBP5.29□□□□□ -1.56
GYPB-215ENST00000513677 LRRC3CA6NJW4 275 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 NCF1CA8MVU1 366 aaPredicted RBP5.29□□□□□ -1.56
GYPB-215ENST00000513677 CDC7O00311 574 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 SAP18O00422 153 aaKnown RBP5.29□□□□□ -1.56
GYPB-215ENST00000513677 CES2O00748 559 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 CTNSO60931 367 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 ERN1O75460 977 aaKnown RBP5.29□□□□□ -1.56
GYPB-215ENST00000513677 BANF1O75531 89 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 ETHE1O95571 254 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 EPPINO95925 133 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 TMIGD3P0DMS9 266 aaPredicted RBP5.29□□□□□ -1.56
GYPB-215ENST00000513677 C1GALT1C1LP0DN25 315 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 COX7A2P14406 83 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 NCF1P14598 390 aaPredicted RBP5.29□□□□□ -1.56
GYPB-215ENST00000513677 ZNF10P21506 573 aaPredicted RBP5.29□□□□□ -1.56
GYPB-215ENST00000513677 CPOXP36551 454 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 ZNF136P52737 540 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 MTTPP55157 894 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 LIM2P55344 173 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 AP1S2P56377 157 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 SRYQ05066 204 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms