RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 SVILO95425 2214 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 A0A1W2PP18 115 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 BBIP1A8MTZ0 92 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 MASP2O00187 686 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 HRKO00198 91 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 UPK1AO00322 258 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 RFXANKO14593 260 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 ANGPT2O15123 496 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 EMC8O43402 210 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 CEACAM4O75871 244 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 DNAJB5O75953 348 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 ZFAND5O76080 213 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 PSMG1O95456 288 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 CLPSP04118 112 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 ABCB1P08183 1280 aaPredicted RBP7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 CELA2AP08217 269 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 SNRPB2P08579 225 aaKnown RBP7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 CAPN3P20807 821 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 S1PR1P21453 382 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 SOAT1P35610 550 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 RNF144AP50876 292 aaPredicted RBP7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 RNF4P78317 190 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 RHDQ02161 417 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 MYBPC3Q14896 1274 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 EXOSC7Q15024 291 aaKnown RBP7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 EBPQ15125 230 aaKnown RBP7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 MAPKAPK3Q16644 382 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 TRMT12Q53H54 448 aaKnown RBP7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 C6orf10Q5SRN2 563 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 H3F3CQ6NXT2 135 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 BHLHB9Q6PI77 547 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 HSDL2Q6YN16 418 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 SZRD1Q7Z422 152 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 MTDHQ86UE4 582 aaKnown RBP7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 ANKRD46Q86W74 232 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 C9orf40Q8IXQ3 194 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 LGI4Q8N135 537 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 ARMC10Q8N2F6 343 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 KIF2BQ8N4N8 673 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 SLC5A8Q8N695 610 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 TRIML2Q8N7C3 387 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 ZNF321PQ8N8H1 164 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 ZNF615Q8N8J6 731 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 C17orf47Q8NEP4 570 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 OR52R1Q8NGF1 315 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 OR56A1Q8NGH5 318 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 OR5L2Q8NGL0 311 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 OR4A15Q8NGL6 344 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 C16orf52Q8NHV5 167 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 RNF217Q8TC41 542 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 BRIX1Q8TDN6 353 aaKnown RBP7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 DOK4Q8TEW6 326 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 VPS33AQ96AX1 596 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 MOAP1Q96BY2 351 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 FAM120BQ96EK7 910 aaKnown RBP7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 ITCHQ96J02 903 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 LRRC37BQ96QE4 947 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 PANX1Q96RD7 426 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 SLC25A23Q9BV35 468 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 DEFB126Q9BYW3 111 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 WWTR1Q9GZV5 400 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 MYLK2Q9H1R3 596 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 CXorf36Q9H7Y0 433 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 SLC52A3Q9NQ40 469 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 SERHLQ9NQF3 203 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 ZCCHC3Q9NUD5 404 aaKnown RBP7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 NTMQ9P121 344 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 ARMCX1Q9P291 453 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 TEKT2Q9UIF3 430 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 LEF1Q9UJU2 399 aaPredicted RBP7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 VPS4AQ9UN37 437 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 NDUFAF1Q9Y375 327 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 PCDHGA9Q9Y5G4 932 aaKnown RBP7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 HEMK1Q9Y5R4 338 aaPredicted RBP7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 SNX8Q9Y5X2 465 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 COL6A6A6NMZ7 2263 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 GTF3C1Q12789 2109 aa7.04□□□□□ -1.28
HMGXB3-204ENST00000513318 DSPP15924 2871 aaKnown RBP7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 ZGRF1Q86YA3 2104 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 RNF103-CHMP3A0A140T963 221 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 C2orf92A0A1B0GVN3 265 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 ASPDHA6ND91 283 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 TTC36A6NLP5 189 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 TMEM229AB2RXF0 380 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 MKRN2OSH3BPM6 223 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 CDK2AP1O14519 115 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 PRKNO60260 465 aaPredicted RBP7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 MAN1A2O60476 641 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 ERN1O75460 977 aaKnown RBP7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 ANP32DO95626 131 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 CPSF4O95639 269 aaKnown RBP7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 ALPPP05187 535 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 KRT16P08779 473 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 ZCCHC18P0CG32 403 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 UQCRC2P22695 453 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 TRPC1P48995 793 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 CCT3P49368 545 aaKnown RBP7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 EMDP50402 254 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 CCL11P51671 97 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 POLE2P56282 527 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms