RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 BCAP29Q9UHQ4 241 aa9.32□□□□□ -0.92
NUP54-203ENST00000504173 PCDHGB4Q9UN71 923 aa9.32□□□□□ -0.92
NUP54-203ENST00000504173 PPIEQ9UNP9 301 aaKnown RBP9.32□□□□□ -0.92
NUP54-203ENST00000504173 TACC2O95359 2948 aa9.32□□□□□ -0.92
NUP54-203ENST00000504173 PRRC2CQ9Y520 2896 aaKnown RBP9.31□□□□□ -0.92
NUP54-203ENST00000504173 PLOD2O00469 737 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 NR5A2O00482 541 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 CCDC22O60826 627 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 ZFAND5O76080 213 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 CPSF4O95639 269 aaKnown RBP9.31□□□□□ -0.92
NUP54-203ENST00000504173 FAM107AO95990 144 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 IGKV3-11P04433 115 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 IL6P05231 212 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 ABCB1P08183 1280 aaPredicted RBP9.31□□□□□ -0.92
NUP54-203ENST00000504173 ZFP36L2P47974 494 aaKnown RBP9.31□□□□□ -0.92
NUP54-203ENST00000504173 CDK9P50750 372 aaKnown RBP9.31□□□□□ -0.92
NUP54-203ENST00000504173 GPR143P51810 404 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 MLLT10P55197 1068 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 WNT3P56703 355 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 PHC1P78364 1004 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 FUT7Q11130 342 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 RAPSNQ13702 412 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 EXOSC7Q15024 291 aaKnown RBP9.31□□□□□ -0.92
NUP54-203ENST00000504173 TIGD2Q4W5G0 525 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 TRMT12Q53H54 448 aaKnown RBP9.31□□□□□ -0.92
NUP54-203ENST00000504173 LACTB2Q53H82 288 aaPredicted RBP9.31□□□□□ -0.92
NUP54-203ENST00000504173 JMJD6Q6NYC1 403 aaPredicted RBP9.31□□□□□ -0.92
NUP54-203ENST00000504173 HSDL2Q6YN16 418 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 SLC29A4Q7RTT9 530 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 SZRD1Q7Z422 152 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 ANKRD46Q86W74 232 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 CLECL1Q8IZS7 167 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 CPSF7Q8N684 471 aaKnown RBP9.31□□□□□ -0.92
NUP54-203ENST00000504173 SIRT6Q8N6T7 355 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 OR7G2Q8NG99 324 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 OR7G1Q8NGA0 311 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 OR52R1Q8NGF1 315 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 ELP5Q8TE02 316 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 CTHRC1Q96CG8 243 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 ERP27Q96DN0 273 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 DEFB126Q9BYW3 111 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 NMUR2Q9GZQ4 415 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 OR10A5Q9H207 317 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 NEUROD4Q9HD90 331 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 SAR1AQ9NR31 198 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 DDX18Q9NVP1 670 aaKnown RBP9.31□□□□□ -0.92
NUP54-203ENST00000504173 TMEM45AQ9NWC5 275 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 GPR83Q9NYM4 423 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 PTGFRNQ9P2B2 879 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 ZNF223Q9UK11 482 aaPredicted RBP9.31□□□□□ -0.92
NUP54-203ENST00000504173 ARL2BPQ9Y2Y0 163 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 SNX8Q9Y5X2 465 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 ESPL1Q14674 2120 aa9.31□□□□□ -0.92
NUP54-203ENST00000504173 A0A087WV62 115 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 PRSS51A0A1B0GVH4 220 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 CCDC154A6NI56 674 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 OR6C76A6NM76 312 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 A8MUI8 341 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 FCHO1O14526 889 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 HNRNPRO43390 633 aaKnown RBP9.3□□□□□ -0.92
NUP54-203ENST00000504173 PLOD3O60568 738 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 PRAMEF2O60811 474 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 COQ9O75208 318 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 BCAS2O75934 225 aaPredicted RBP9.3□□□□□ -0.92
NUP54-203ENST00000504173 CBX7O95931 251 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 LDLRP01130 860 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 CLPSP04118 112 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 IFI6P09912 130 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 HOXB4P17483 251 aaPredicted RBP9.3□□□□□ -0.92
NUP54-203ENST00000504173 S1PR1P21453 382 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 SOAT1P35610 550 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 SLC37A1P57057 533 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 SOX8P57073 446 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 HBA1P69905 142 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 LRRC74AQ0VAA2 488 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 KLF10Q13118 480 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 RCAN2Q14206 197 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 MYBPC3Q14896 1274 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 MAPKAPK3Q16644 382 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 SPDYE7PQ495Y7 208 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 GKAP1Q5VSY0 366 aaPredicted RBP9.3□□□□□ -0.92
NUP54-203ENST00000504173 AGAP7PQ5VUJ5 663 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 FCRLBQ6BAA4 426 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 BLOC1S3Q6QNY0 202 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 GK5Q6ZS86 529 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 MSANTD1Q6ZTZ1 278 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 PIGWQ7Z7B1 504 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 FUNDC1Q8IVP5 155 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 C9orf40Q8IXQ3 194 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 SLC5A8Q8N695 610 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 ZNF615Q8N8J6 731 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 FDCSPQ8NFU4 85 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 OR5L2Q8NGL0 311 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 OR4A15Q8NGL6 344 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 THAP3Q8WTV1 239 aaPredicted RBP9.3□□□□□ -0.92
NUP54-203ENST00000504173 VPS33AQ96AX1 596 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 SPDL1Q96EA4 605 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 ELP4Q96EB1 424 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 AGAP4Q96P64 663 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 GAL3ST4Q96RP7 486 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms