RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 TMEM120AQ9BXJ8 343 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 NXF5Q9H1B4 397 aaKnown RBP15.25■□□□□ 0.03
SCLT1-205ENST00000503401 FOLH1BQ9HBA9 442 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 EQTNQ9NQ60 294 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 KLHL1Q9NR64 748 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 SDR39U1Q9NRG7 319 aaPredicted RBP15.25■□□□□ 0.03
SCLT1-205ENST00000503401 SIRT3Q9NTG7 399 aaPredicted RBP15.25■□□□□ 0.03
SCLT1-205ENST00000503401 PRODH2Q9UF12 536 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 C19orf53Q9UNZ5 99 aaPredicted RBP15.25■□□□□ 0.03
SCLT1-205ENST00000503401 MAPRE3Q9UPY8 281 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 A0A087WV62 115 aa15.24■□□□□ 0.03
SCLT1-205ENST00000503401 SLC22A3O75751 556 aa15.24■□□□□ 0.03
SCLT1-205ENST00000503401 TROVE2P10155 538 aaKnown RBP eCLIP15.24■□□□□ 0.03
SCLT1-205ENST00000503401 S100A3P33764 101 aa15.24■□□□□ 0.03
SCLT1-205ENST00000503401 TRHRP34981 398 aaPredicted RBP15.24■□□□□ 0.03
SCLT1-205ENST00000503401 CORO7P57737 925 aa15.24■□□□□ 0.03
SCLT1-205ENST00000503401 HBA1P69905 142 aa15.24■□□□□ 0.03
SCLT1-205ENST00000503401 SRSF11Q05519 484 aaKnown RBP15.24■□□□□ 0.03
SCLT1-205ENST00000503401 ZNF155Q12901 538 aaPredicted RBP15.24■□□□□ 0.03
SCLT1-205ENST00000503401 ZNF169Q14929 603 aaPredicted RBP15.24■□□□□ 0.03
SCLT1-205ENST00000503401 MLC1Q15049 377 aa15.24■□□□□ 0.03
SCLT1-205ENST00000503401 PRR22Q8IZ63 422 aa15.24■□□□□ 0.03
SCLT1-205ENST00000503401 CYP4Z2PQ8N1L4 340 aa15.24■□□□□ 0.03
SCLT1-205ENST00000503401 MIER2Q8N344 545 aa15.24■□□□□ 0.03
SCLT1-205ENST00000503401 MDS2Q8NDY4 140 aa15.24■□□□□ 0.03
SCLT1-205ENST00000503401 OR5P2Q8WZ92 322 aa15.24■□□□□ 0.03
SCLT1-205ENST00000503401 VSTM2LQ96N03 204 aa15.24■□□□□ 0.03
SCLT1-205ENST00000503401 CXorf36Q9H7Y0 433 aa15.24■□□□□ 0.03
SCLT1-205ENST00000503401 TAS2R9Q9NYW1 312 aa15.24■□□□□ 0.03
SCLT1-205ENST00000503401 ERVK-11Q9UQG0 969 aa15.24■□□□□ 0.03
SCLT1-205ENST00000503401 CFL2Q9Y281 166 aa15.24■□□□□ 0.03
SCLT1-205ENST00000503401 TRAV17A0A0B4J275 112 aa15.23■□□□□ 0.03
SCLT1-205ENST00000503401 A8MVJ9 347 aa15.23■□□□□ 0.03
SCLT1-205ENST00000503401 SCN2BO60939 215 aa15.23■□□□□ 0.03
SCLT1-205ENST00000503401 BCAS2O75934 225 aaPredicted RBP15.23■□□□□ 0.03
SCLT1-205ENST00000503401 SLITRK5O94991 958 aa15.23■□□□□ 0.03
SCLT1-205ENST00000503401 ZFP36L2P47974 494 aaKnown RBP15.23■□□□□ 0.03
SCLT1-205ENST00000503401 MDGA2Q7Z553 956 aa15.23■□□□□ 0.03
SCLT1-205ENST00000503401 CLEC4FQ8N1N0 589 aa15.23■□□□□ 0.03
SCLT1-205ENST00000503401 OR5M3Q8NGP4 307 aa15.23■□□□□ 0.03
SCLT1-205ENST00000503401 SLC22A8Q8TCC7 542 aa15.23■□□□□ 0.03
SCLT1-205ENST00000503401 ZBTB18Q99592 522 aa15.23■□□□□ 0.03
SCLT1-205ENST00000503401 SIKE1Q9BRV8 207 aa15.23■□□□□ 0.03
SCLT1-205ENST00000503401 HPF1Q9NWY4 346 aa15.23■□□□□ 0.03
SCLT1-205ENST00000503401 ZIM2Q9NZV7 527 aa15.23■□□□□ 0.03
SCLT1-205ENST00000503401 COPG1Q9Y678 874 aaKnown RBP15.23■□□□□ 0.03
SCLT1-205ENST00000503401 ZNF462Q96JM2 2506 aa15.23■□□□□ 0.03
SCLT1-205ENST00000503401 NINQ8N4C6 2090 aa15.23■□□□□ 0.03
SCLT1-205ENST00000503401 RNASET2O00584 256 aaKnown RBP15.22■□□□□ 0.03
SCLT1-205ENST00000503401 COQ9O75208 318 aa15.22■□□□□ 0.03
SCLT1-205ENST00000503401 ERN1O75460 977 aaKnown RBP15.22■□□□□ 0.03
SCLT1-205ENST00000503401 SLC25A12O75746 678 aa15.22■□□□□ 0.03
SCLT1-205ENST00000503401 PSMG1O95456 288 aa15.22■□□□□ 0.03
SCLT1-205ENST00000503401 CPSF4O95639 269 aaKnown RBP15.22■□□□□ 0.03
SCLT1-205ENST00000503401 PGRP06401 933 aa15.22■□□□□ 0.03
SCLT1-205ENST00000503401 CD1EP15812 388 aa15.22■□□□□ 0.03
SCLT1-205ENST00000503401 NCF2P19878 526 aaPredicted RBP15.22■□□□□ 0.03
SCLT1-205ENST00000503401 SEC24CP53992 1094 aa15.22■□□□□ 0.03
SCLT1-205ENST00000503401 STX1BP61266 288 aa15.22■□□□□ 0.03
SCLT1-205ENST00000503401 PRR30Q53SZ7 412 aaPredicted RBP15.22■□□□□ 0.03
SCLT1-205ENST00000503401 ZNF766Q5HY98 468 aa15.22■□□□□ 0.03
SCLT1-205ENST00000503401 LYPD8Q6UX82 237 aa15.22■□□□□ 0.03
SCLT1-205ENST00000503401 NPSR1Q6W5P4 371 aa15.22■□□□□ 0.03
SCLT1-205ENST00000503401 MTERF4Q7Z6M4 381 aaKnown RBP15.22■□□□□ 0.03
SCLT1-205ENST00000503401 NATD1Q8N6N6 113 aa15.22■□□□□ 0.03
SCLT1-205ENST00000503401 NUP43Q8NFH3 380 aa15.22■□□□□ 0.03
SCLT1-205ENST00000503401 OR4A15Q8NGL6 344 aa15.22■□□□□ 0.03
SCLT1-205ENST00000503401 OR5AK3PQ8NH89 298 aa15.22■□□□□ 0.03
SCLT1-205ENST00000503401 FBXO30Q8TB52 745 aa15.22■□□□□ 0.03
SCLT1-205ENST00000503401 TP53INP1Q96A56 240 aa15.22■□□□□ 0.03
SCLT1-205ENST00000503401 FAM120BQ96EK7 910 aaKnown RBP15.22■□□□□ 0.03
SCLT1-205ENST00000503401 LCORQ96JN0 433 aaPredicted RBP15.22■□□□□ 0.03
SCLT1-205ENST00000503401 TRIM4Q9C037 500 aa15.22■□□□□ 0.03
SCLT1-205ENST00000503401 ZCCHC3Q9NUD5 404 aaKnown RBP15.22■□□□□ 0.03
SCLT1-205ENST00000503401 ANAPC2Q9UJX6 822 aa15.22■□□□□ 0.03
SCLT1-205ENST00000503401 NBASA2RRP1 2371 aa15.22■□□□□ 0.03
SCLT1-205ENST00000503401 SVILO95425 2214 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 B8ZZF3 427 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 EMC8O43402 210 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 SORBS2O94875 1100 aaKnown RBP15.21■□□□□ 0.03
SCLT1-205ENST00000503401 CT45A8P0DMV1 189 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 CT45A9P0DMV2 189 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 ABCD3P28288 659 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 SOAT1P35610 550 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 PPICP45877 212 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 MLLT10P55197 1068 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 MAPKAPK3Q16644 382 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 DPY19L1Q2PZI1 675 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 CT45A2Q5DJT8 189 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 OPN5Q6U736 354 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 PRICKLE2Q7Z3G6 844 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 TAGAPQ8N103 731 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 OR4N2Q8NGD1 307 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 PSMA8Q8TAA3 256 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 GIMAP5Q96F15 307 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 OTUB1Q96FW1 271 aaPredicted RBP15.21■□□□□ 0.03
SCLT1-205ENST00000503401 CHMP6Q96FZ7 201 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 BTBD9Q96Q07 612 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 OR52E6Q96RD3 313 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms