RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 RHBGQ9H310 441 aa6.9□□□□□ -1.3
VPS45-210ENST00000497638 PIGMQ9H3S5 423 aa6.9□□□□□ -1.3
VPS45-210ENST00000497638 CALHM2Q9HA72 323 aa6.9□□□□□ -1.3
VPS45-210ENST00000497638 SH2D2AQ9NP31 389 aa6.9□□□□□ -1.3
VPS45-210ENST00000497638 PRTFDC1Q9NRG1 225 aa6.9□□□□□ -1.3
VPS45-210ENST00000497638 YAE1D1Q9NRH1 226 aa6.9□□□□□ -1.3
VPS45-210ENST00000497638 TREX1Q9NSU2 369 aa6.9□□□□□ -1.3
VPS45-210ENST00000497638 ZNHIT6Q9NWK9 470 aaKnown RBP6.9□□□□□ -1.3
VPS45-210ENST00000497638 KLHL42Q9P2K6 505 aa6.9□□□□□ -1.3
VPS45-210ENST00000497638 SH2B3Q9UQQ2 575 aa6.9□□□□□ -1.3
VPS45-210ENST00000497638 MRPS33Q9Y291 106 aaKnown RBP6.9□□□□□ -1.3
VPS45-210ENST00000497638 CLCA3PQ9Y6N3 262 aa6.9□□□□□ -1.3
VPS45-210ENST00000497638 GOLGA6L9A6NEM1 432 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 A8MV72 311 aaPredicted RBP6.89□□□□□ -1.31
VPS45-210ENST00000497638 APOL3O95236 402 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 CRYGSP22914 178 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 PTX3P26022 381 aaPredicted RBP6.89□□□□□ -1.31
VPS45-210ENST00000497638 GDF1P27539 372 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 PPP2R1BP30154 601 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 CTNNA1P35221 906 aaKnown RBP6.89□□□□□ -1.31
VPS45-210ENST00000497638 AHRP35869 848 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 FDFT1P37268 417 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 UBASH3AP57075 661 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 RAB8AP61006 207 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 EEF1A1P68104 462 aaKnown RBP6.89□□□□□ -1.31
VPS45-210ENST00000497638 CCZ1BP86790 482 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 CCZ1P86791 482 aaPredicted RBP6.89□□□□□ -1.31
VPS45-210ENST00000497638 VEZF1Q14119 521 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 MPEG1Q2M385 716 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 PCID2Q5JVF3 399 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 C10orf62Q5T681 223 aaPredicted RBP6.89□□□□□ -1.31
VPS45-210ENST00000497638 EEF1A1P5Q5VTE0 462 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 UBE2R2Q712K3 238 aaPredicted RBP6.89□□□□□ -1.31
VPS45-210ENST00000497638 LUZP2Q86TE4 346 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 DND1Q8IYX4 353 aaKnown RBP6.89□□□□□ -1.31
VPS45-210ENST00000497638 CMTM4Q8IZR5 234 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 TC2NQ8N9U0 490 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 OR4K1Q8NGD4 311 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 OR8K1Q8NGG5 319 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 SLC22A8Q8TCC7 542 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 C16orf92Q96LL3 132 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 ZNF597Q96LX8 424 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 CCDC42Q96M95 316 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 REG4Q9BYZ8 158 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 CHRAC1Q9NRG0 131 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 LMBRD1Q9NUN5 540 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 CNIH4Q9P003 139 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 GALPQ9UBC7 116 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 PACSIN3Q9UKS6 424 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 CAMK2AQ9UQM7 478 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 ZNF148Q9UQR1 794 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 CLDN16Q9Y5I7 305 aa6.89□□□□□ -1.31
VPS45-210ENST00000497638 MED12Q93074 2177 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 MED12LQ86YW9 2145 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 E7EVH7 732 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 EIF3FO00303 357 aaPredicted RBP6.88□□□□□ -1.31
VPS45-210ENST00000497638 ZNF354AO60765 605 aaPredicted RBP6.88□□□□□ -1.31
VPS45-210ENST00000497638 SIX3O95343 332 aaPredicted RBP6.88□□□□□ -1.31
VPS45-210ENST00000497638 C1QAP02745 245 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 IFNA16P05015 189 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 SMIM10L1P0DMW3 83 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 OGNP20774 298 aaKnown RBP6.88□□□□□ -1.31
VPS45-210ENST00000497638 CPOXP36551 454 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 GRIA1P42261 906 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 RPL21P46778 160 aaKnown RBP6.88□□□□□ -1.31
VPS45-210ENST00000497638 TPM4P67936 248 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 SLC13A2Q13183 592 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 NAE1Q13564 534 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 CLEC12BQ2HXU8 276 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 ZNF791Q3KP31 576 aaPredicted RBP6.88□□□□□ -1.31
VPS45-210ENST00000497638 PIGGQ5H8A4 983 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 NHSL2Q5HYW2 709 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 PRAMEF20Q5VT98 475 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 AGTRAPQ6RW13 159 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 SCIMPQ6UWF3 145 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 CAND1Q86VP6 1230 aaKnown RBP6.88□□□□□ -1.31
VPS45-210ENST00000497638 ZNF595Q8IYB9 648 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 C9orf106Q8NAJ2 232 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 MAPK1IP1LQ8NDC0 245 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 TRPV3Q8NET8 790 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 GABPB2Q8TAK5 448 aaPredicted RBP6.88□□□□□ -1.31
VPS45-210ENST00000497638 NUBPLQ8TB37 319 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 ZPLD1Q8TCW7 415 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 UCN3Q969E3 161 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 SPACA9Q96E40 222 aaPredicted RBP6.88□□□□□ -1.31
VPS45-210ENST00000497638 SMIM10Q96HG1 83 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 JSRP1Q96MG2 331 aaPredicted RBP6.88□□□□□ -1.31
VPS45-210ENST00000497638 CLUHP3Q96NS8 147 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 DOHHQ9BU89 302 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 MED18Q9BUE0 208 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 NPLQ9BXD5 320 aaPredicted RBP6.88□□□□□ -1.31
VPS45-210ENST00000497638 OR8D2Q9GZM6 311 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 IL22Q9GZX6 179 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 PSD3Q9NYI0 1048 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 COPS7AQ9UBW8 275 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 CRYL1Q9Y2S2 319 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 IKBKGQ9Y6K9 419 aa6.88□□□□□ -1.31
VPS45-210ENST00000497638 A8MXE2 369 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 SPRY1O43609 319 aaPredicted RBP6.87□□□□□ -1.31
VPS45-210ENST00000497638 RCBTB2O95199 551 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms