RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 IGHV3-13P01766 116 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 PGK2P07205 417 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 HIST1H2AGP0C0S8 130 aaPredicted RBP3.56□□□□□ -1.84
SMC4-224ENST00000494612 CYP11B1P15538 503 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 ACADSP16219 412 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 GAP43P17677 238 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 CALML3P27482 149 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 HMGCLP35914 325 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 ALDH3B1P43353 468 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 RABIFP47224 123 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 NPY2RP49146 381 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 GSTO1P78417 241 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 CYLC2Q14093 348 aaPredicted RBP3.56□□□□□ -1.84
SMC4-224ENST00000494612 KARSQ15046 597 aaKnown RBP3.56□□□□□ -1.84
SMC4-224ENST00000494612 SLC1A5Q15758 541 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 ZKSCAN8Q15776 578 aaPredicted RBP3.56□□□□□ -1.84
SMC4-224ENST00000494612 PKN2Q16513 984 aaKnown RBP3.56□□□□□ -1.84
SMC4-224ENST00000494612 CDC37Q16543 378 aaPredicted RBP3.56□□□□□ -1.84
SMC4-224ENST00000494612 TATDN1Q6P1N9 297 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 MIER3Q7Z3K6 550 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 TAF8Q7Z7C8 310 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 LUZP1Q86V48 1076 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.56□□□□□ -1.84
SMC4-224ENST00000494612 LRRC17Q8N6Y2 441 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 C4orf32Q8N8J7 132 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 PHYHIPQ92561 330 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 RASL10AQ92737 203 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 HIST1H2ACQ93077 130 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 NSMCE2Q96MF7 247 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 ATF6BQ99941 703 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 SPXQ9BT56 116 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 UBXN6Q9BZV1 441 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 GNB4Q9HAV0 340 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 ELL3Q9HB65 397 aaPredicted RBP3.56□□□□□ -1.84
SMC4-224ENST00000494612 NINJ2Q9NZG7 142 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 RCOR3Q9P2K3 495 aaPredicted RBP3.56□□□□□ -1.84
SMC4-224ENST00000494612 KCNN3Q9UGI6 736 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 KLK13Q9UKR3 277 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 RARRES3Q9UL19 164 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 KLF2Q9Y5W3 355 aaPredicted RBP3.56□□□□□ -1.84
SMC4-224ENST00000494612 CFAP65Q6ZU64 1925 aaKnown RBP3.56□□□□□ -1.84
SMC4-224ENST00000494612 CEP152O94986 1710 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 TIAM1Q13009 1591 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 ABCC3O15438 1527 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 MAP3K1Q13233 1512 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 CCDC141Q6ZP82 1450 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 ACOD1A6NK06 481 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 ADAM12O43184 909 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 PHF1O43189 567 aaPredicted RBP3.55□□□□□ -1.84
SMC4-224ENST00000494612 TXNL1O43396 289 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 SEMA4FO95754 770 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 OAS1P00973 400 aaKnown RBP3.55□□□□□ -1.84
SMC4-224ENST00000494612 FCER2P06734 321 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 FCARP24071 287 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 LMO2P25791 158 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 SHC1P29353 583 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 SPRP35270 261 aaPredicted RBP3.55□□□□□ -1.84
SMC4-224ENST00000494612 ZFP36L1Q07352 338 aaKnown RBP3.55□□□□□ -1.84
SMC4-224ENST00000494612 LPAL2Q16609 132 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 C9orf66Q5T8R8 295 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 C1orf189Q5VU69 101 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 AGAP7PQ5VUJ5 663 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 WDR25Q64LD2 544 aaPredicted RBP3.55□□□□□ -1.84
SMC4-224ENST00000494612 YRDCQ86U90 279 aaKnown RBP3.55□□□□□ -1.84
SMC4-224ENST00000494612 GTSCR1Q86UQ5 136 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 SLC47A2Q86VL8 602 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 ZNF619Q8N2I2 560 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 RDH11Q8TC12 318 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 TMEM37Q8WXS4 190 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 P3H4Q92791 437 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 TMEM45BQ96B21 275 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 ACCSQ96QU6 501 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 SPAG8Q99932 426 aaPredicted RBP3.55□□□□□ -1.84
SMC4-224ENST00000494612 DCTN5Q9BTE1 182 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 NACA2Q9H009 215 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 NRN1Q9NPD7 142 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 SEC14L4Q9UDX3 406 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 TRIM10Q9UDY6 481 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 ODF2LQ9ULJ1 636 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 PLA2G4CQ9UP65 541 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 SLC9A8Q9Y2E8 581 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 LRP6O75581 1613 aa3.55□□□□□ -1.84
SMC4-224ENST00000494612 COL16A1Q07092 1604 aaPredicted RBP3.55□□□□□ -1.84
SMC4-224ENST00000494612 SLIT1O75093 1534 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 PRDM15P57071 1507 aaPredicted RBP3.54□□□□□ -1.84
SMC4-224ENST00000494612 CDK12Q9NYV4 1490 aaPredicted RBP3.54□□□□□ -1.84
SMC4-224ENST00000494612 MBD5Q9P267 1494 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 AFF2P51816 1311 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 IGKV6D-41A0A0C4DH26 115 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 LRRTM2O43300 516 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 TSPAN2O60636 221 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 SEC22BO75396 215 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 FRAT2O75474 233 aaPredicted RBP3.54□□□□□ -1.84
SMC4-224ENST00000494612 STAM2O75886 525 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 PTBP3O95758 552 aaKnown RBP3.54□□□□□ -1.84
SMC4-224ENST00000494612 TGFAP01135 160 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 MT-ND1P03886 318 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 TSPY4P0CV99 314 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 TSPY10P0CW01 314 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 HSD17B1P14061 328 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms