RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 ANGPTL8Q6UXH0 198 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 CLEC4FQ8N1N0 589 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 VWA5B2Q8N398 1253 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 DPP10Q8N608 796 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 OR11G2Q8NGC1 345 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 OR14A16Q8NHC5 309 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 DNAJB8Q8NHS0 232 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 ZNF675Q8TD23 568 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 DAZLQ92904 295 aaKnown RBP12.49□□□□□ -0.41
MSH6-208ENST00000493177 ELP4Q96EB1 424 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 AGAP4Q96P64 663 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 LPAR4Q99677 370 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 SLC35A5Q9BS91 424 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 OR8D2Q9GZM6 311 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 LHPPQ9H008 270 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 PAIP1Q9H074 479 aaKnown RBP12.49□□□□□ -0.41
MSH6-208ENST00000493177 ZNF552Q9H707 407 aaPredicted RBP12.49□□□□□ -0.41
MSH6-208ENST00000493177 CXorf21Q9HAI6 301 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 C3orf14Q9HBI5 128 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 DDX18Q9NVP1 670 aaKnown RBP12.49□□□□□ -0.41
MSH6-208ENST00000493177 MAT2BQ9NZL9 334 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 SLAMF8Q9P0V8 285 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 BCAP29Q9UHQ4 241 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 ERVK-19Q9WJR5 959 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 DOCK10Q96BY6 2186 aa12.49□□□□□ -0.41
MSH6-208ENST00000493177 SAGE2PA6NJ88 616 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 PCDH17O14917 1159 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 EMC8O43402 210 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 ATP5HO75947 161 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 SLITRK5O94991 958 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 T-ENOLP0DO92 83 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 CCT3P49368 545 aaKnown RBP12.48□□□□□ -0.41
MSH6-208ENST00000493177 PRR5P85299 388 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 BNIP1Q12981 228 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 GAB1Q13480 694 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 TP53BP2Q13625 1128 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 SPRED3Q2MJR0 410 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 TRMT12Q53H54 448 aaKnown RBP12.48□□□□□ -0.41
MSH6-208ENST00000493177 SLC6A19Q695T7 634 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 NUP43Q8NFH3 380 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 OR7G2Q8NG99 324 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 GOT1L1Q8NHS2 421 aaPredicted RBP12.48□□□□□ -0.41
MSH6-208ENST00000493177 PTPMT1Q8WUK0 201 aaPredicted RBP12.48□□□□□ -0.41
MSH6-208ENST00000493177 PNPLA2Q96AD5 504 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 MOAP1Q96BY2 351 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 ROPN1LQ96C74 230 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 ART5Q96L15 291 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 CGREF1Q99674 301 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 MESP1Q9BRJ9 268 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 ANKRA2Q9H9E1 313 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 SIRT3Q9NTG7 399 aaPredicted RBP12.48□□□□□ -0.41
MSH6-208ENST00000493177 ZCCHC3Q9NUD5 404 aaKnown RBP12.48□□□□□ -0.41
MSH6-208ENST00000493177 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.48□□□□□ -0.41
MSH6-208ENST00000493177 PTGFRNQ9P2B2 879 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 PCDHB14Q9Y5E9 798 aa12.48□□□□□ -0.41
MSH6-208ENST00000493177 FASNP49327 2511 aaKnown RBP12.47□□□□□ -0.41
MSH6-208ENST00000493177 LOC102723996A0A087X1L8 192 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 HRKO00198 91 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 PLOD2O00469 737 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 KRT16P08779 473 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 SSTR4P31391 388 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 AP2B1P63010 937 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 SLC25A3Q00325 362 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 MGAT2Q10469 447 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 MAP4K2Q12851 820 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 EXOSC7Q15024 291 aaKnown RBP12.47□□□□□ -0.41
MSH6-208ENST00000493177 LRIF1Q5T3J3 769 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 BHLHB9Q6PI77 547 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 C16orf89Q6UX73 402 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 DLEU7Q6UYE1 221 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 TMEM64Q6YI46 380 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 LINC00696Q6ZRV3 163 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 RINLQ6ZS11 566 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 NDUFAF7Q7L592 441 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 KBTBD2Q8IY47 623 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 RBMXL3Q8N7X1 1067 aaKnown RBP12.47□□□□□ -0.41
MSH6-208ENST00000493177 OR52R1Q8NGF1 315 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 OR56A1Q8NGH5 318 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 PSMA8Q8TAA3 256 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 PNPT1Q8TCS8 783 aaKnown RBP12.47□□□□□ -0.41
MSH6-208ENST00000493177 SLC2A12Q8TD20 617 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 SFXN5Q8TD22 340 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 MIB2Q96AX9 1013 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 LRRC58Q96CX6 371 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 FAM120BQ96EK7 910 aaKnown RBP12.47□□□□□ -0.41
MSH6-208ENST00000493177 AURKBQ96GD4 344 aaPredicted RBP12.47□□□□□ -0.41
MSH6-208ENST00000493177 SENP5Q96HI0 755 aaPredicted RBP12.47□□□□□ -0.41
MSH6-208ENST00000493177 SLC35G5Q96KT7 338 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 SLC39A3Q9BRY0 314 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 EQTNQ9NQ60 294 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 SLC6A13Q9NSD5 602 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 NDE1Q9NXR1 346 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 VAPAQ9P0L0 249 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 COPS7AQ9UBW8 275 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 ERVK-11Q9UQG0 969 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 B3GNT3Q9Y2A9 372 aa12.47□□□□□ -0.41
MSH6-208ENST00000493177 A0A087WV62 115 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 IGHV1-45A0A0A0MS14 117 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 EVPLLA8MZ36 301 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 UPK1AO00322 258 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms