RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 TGM3Q08188 693 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 SLAMF1Q13291 335 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 CEACAM7Q14002 265 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 GRM7Q14831 915 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 MYBPC3Q14896 1274 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 NKG7Q16617 165 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 MAPKAPK3Q16644 382 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 MPEG1Q2M385 716 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 PRTGQ2VWP7 1150 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 PIGGQ5H8A4 983 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 ZC3H12BQ5HYM0 836 aaKnown RBP7.08□□□□□ -1.28
CLDN1-202ENST00000490800 TCTE1Q5JU00 501 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 WASHC2DQ5SRD0 308 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 FHL5Q5TD97 284 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 SLC6A19Q695T7 634 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 PRMT9Q6P2P2 845 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 TRIM40Q6P9F5 258 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 SHISA6Q6ZSJ9 500 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 OVCH1Q7RTY7 1134 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 R3HCC1LQ7Z5L2 792 aaKnown RBP7.08□□□□□ -1.28
CLDN1-202ENST00000490800 GPR180Q86V85 440 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 ANKRD46Q86W74 232 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 LSRQ86X29 649 aaPredicted RBP7.08□□□□□ -1.28
CLDN1-202ENST00000490800 HPS6Q86YV9 775 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 MSRB3Q8IXL7 192 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 SLC15A3Q8IY34 581 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 TMEM132CQ8N3T6 1108 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 FBXW8Q8N3Y1 598 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 ARHGEF39Q8N4T4 335 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 CISD2Q8N5K1 135 aaKnown RBP7.08□□□□□ -1.28
CLDN1-202ENST00000490800 METTL27Q8N6F8 245 aaPredicted RBP7.08□□□□□ -1.28
CLDN1-202ENST00000490800 ACOT4Q8N9L9 421 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 CLEC1AQ8NC01 280 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 ZCCHC10Q8TBK6 192 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 PNPLA2Q96AD5 504 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 TMEM125Q96AQ2 219 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 MTERF3Q96E29 417 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 ITCHQ96J02 903 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 ZNF285Q96NJ3 590 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 CGREF1Q99674 301 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 HOPXQ9BPY8 73 aaPredicted RBP7.08□□□□□ -1.28
CLDN1-202ENST00000490800 INPP5KQ9BT40 448 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 DUSP26Q9BV47 211 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 WNT10AQ9GZT5 417 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 PAIP1Q9H074 479 aaKnown RBP7.08□□□□□ -1.28
CLDN1-202ENST00000490800 ZBTB20Q9HC78 741 aaPredicted RBP7.08□□□□□ -1.28
CLDN1-202ENST00000490800 CUTCQ9NTM9 273 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 FAM120CQ9NX05 1096 aaKnown RBP7.08□□□□□ -1.28
CLDN1-202ENST00000490800 CMTM6Q9NX76 183 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 TEX10Q9NXF1 929 aaPredicted RBP7.08□□□□□ -1.28
CLDN1-202ENST00000490800 ADA2Q9NZK5 511 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 C5AR2Q9P296 337 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 TMEM181Q9P2C4 612 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 ABCD2Q9UBJ2 740 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 SLC7A8Q9UHI5 535 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 MRPS2Q9Y399 296 aaKnown RBP7.08□□□□□ -1.28
CLDN1-202ENST00000490800 ASB4Q9Y574 426 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 PCDHA9Q9Y5H5 950 aa7.08□□□□□ -1.28
CLDN1-202ENST00000490800 A0A096LPI6 279 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 TRBV5-3A0A0A0MS03 114 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 PRSS51A0A1B0GVH4 220 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 A0A1B0GX78 115 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 A0A1W2PR48 441 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 HYKKA2RU49 373 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 URADA6NGE7 173 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 H0YHG0 523 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 NME4O00746 187 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 DSCR3O14972 297 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 SMAD7O15105 426 aaKnown RBP7.07□□□□□ -1.28
CLDN1-202ENST00000490800 SRPX2O60687 465 aaPredicted RBP7.07□□□□□ -1.28
CLDN1-202ENST00000490800 SEMA7AO75326 666 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 ALOX12BO75342 701 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 ERN1O75460 977 aaKnown RBP7.07□□□□□ -1.28
CLDN1-202ENST00000490800 CIB2O75838 187 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 AGFG2O95081 481 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 KCNH1O95259 989 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 MED26O95402 600 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 ONECUT2O95948 504 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 IGHEP01854 428 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 ALOX12P18054 663 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 DDCP20711 480 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 EFNA1P20827 205 aaPredicted RBP7.07□□□□□ -1.28
CLDN1-202ENST00000490800 PTPN6P29350 595 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 NTF4P34130 210 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 CDKN2CP42773 168 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 TSFMP43897 325 aaKnown RBP7.07□□□□□ -1.28
CLDN1-202ENST00000490800 TRPC1P48995 793 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 SOX8P57073 446 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 MRPL49Q13405 166 aaKnown RBP7.07□□□□□ -1.28
CLDN1-202ENST00000490800 RUNX2Q13950 521 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 SELPLGQ14242 412 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 MUM1Q2TAK8 710 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 FAM214AQ32MH5 1076 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 GTDC1Q4AE62 458 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 C6orf10Q5SRN2 563 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 LRIF1Q5T3J3 769 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 ANXA8L1Q5VT79 327 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 YOD1Q5VVQ6 348 aaPredicted RBP7.07□□□□□ -1.28
CLDN1-202ENST00000490800 NANOGP8Q6NSW7 305 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 COX15Q7KZN9 410 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms