RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 IL12AP29459 219 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 SOAT1P35610 550 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 CD96P40200 585 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 HLCSP50747 726 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 CDK9P50750 372 aaKnown RBP14.57□□□□□ -0.08
C9orf3-219ENST00000488186 DGKQP52824 942 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 SEC24CP53992 1094 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 KCNK10P57789 538 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 LRRC74AQ0VAA2 488 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 C19orf57Q0VDD7 668 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 TUBA3CQ13748 450 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 TLR1Q15399 786 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 PIGGQ5H8A4 983 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 TUBA3EQ6PEY2 450 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 BHLHB9Q6PI77 547 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 IL20RBQ6UXL0 311 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 OR2L13Q8N349 312 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 ZNF843Q8N446 348 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 SLC15A4Q8N697 577 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 NUP43Q8NFH3 380 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 LCORQ96JN0 433 aaPredicted RBP14.57□□□□□ -0.08
C9orf3-219ENST00000488186 RASL10BQ96S79 203 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 RMND5AQ9H871 391 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 NEUROD4Q9HD90 331 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 EQTNQ9NQ60 294 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 ZCCHC3Q9NUD5 404 aaKnown RBP14.57□□□□□ -0.08
C9orf3-219ENST00000488186 FAM120CQ9NX05 1096 aaKnown RBP14.57□□□□□ -0.08
C9orf3-219ENST00000488186 LRFN1Q9P244 771 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 B3GNT3Q9Y2A9 372 aa14.57□□□□□ -0.08
C9orf3-219ENST00000488186 COPG1Q9Y678 874 aaKnown RBP14.57□□□□□ -0.08
C9orf3-219ENST00000488186 TNRC6AQ8NDV7 1962 aaKnown RBP14.56□□□□□ -0.08
C9orf3-219ENST00000488186 TRAV17A0A0B4J275 112 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 FAM234BA2RU67 622 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 TMEM200CA6NKL6 621 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 B8ZZF3 427 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 C1QL1O75973 258 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 IFI6P09912 130 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 CD46P15529 392 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 GPX3P22352 226 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 KRT20P35900 424 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 CCT3P49368 545 aaKnown RBP14.56□□□□□ -0.08
C9orf3-219ENST00000488186 EMDP50402 254 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 ATP4BP51164 291 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 OR1C1Q15619 314 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 AGKQ53H12 422 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 FHL5Q5TD97 284 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 ANKRD46Q86W74 232 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 GPALPP1Q8IXQ4 340 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 CLECL1Q8IZS7 167 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 ARMC10Q8N2F6 343 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 RBMXL3Q8N7X1 1067 aaKnown RBP14.56□□□□□ -0.08
C9orf3-219ENST00000488186 SIMC1Q8NDZ2 872 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 CATSPER1Q8NEC5 780 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 MOAP1Q96BY2 351 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 C5orf34Q96MH7 638 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 ELAC2Q9BQ52 826 aaKnown RBP14.56□□□□□ -0.08
C9orf3-219ENST00000488186 ITPAQ9BY32 194 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 FOLH1BQ9HBA9 442 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 RYDENQ9NUL5 291 aaKnown RBP14.56□□□□□ -0.08
C9orf3-219ENST00000488186 MRGBPQ9NV56 204 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 CCDC167Q9P0B6 97 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 ANAPC2Q9UJX6 822 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 RALYQ9UKM9 306 aaKnown RBP14.56□□□□□ -0.08
C9orf3-219ENST00000488186 OR10H1Q9Y4A9 318 aa14.56□□□□□ -0.08
C9orf3-219ENST00000488186 ERN1O75460 977 aaKnown RBP14.55□□□□□ -0.08
C9orf3-219ENST00000488186 ANP32DO95626 131 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 DRD5P21918 477 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 TRHRP34981 398 aaPredicted RBP14.55□□□□□ -0.08
C9orf3-219ENST00000488186 SOX3P41225 446 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 PPICP45877 212 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 TMED10P49755 219 aaKnown RBP14.55□□□□□ -0.08
C9orf3-219ENST00000488186 TNFSF10P50591 281 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 HBA1P69905 142 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 DUSP8Q13202 625 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 TP53BP2Q13625 1128 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 ZNF169Q14929 603 aaPredicted RBP14.55□□□□□ -0.08
C9orf3-219ENST00000488186 NNATQ16517 81 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 MAPKAPK3Q16644 382 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 VPS26BQ4G0F5 336 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 NADK2Q4G0N4 442 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 CGB2Q6NT52 195 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 SPATA21Q7Z572 469 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 SLC44A2Q8IWA5 706 aaPredicted RBP14.55□□□□□ -0.08
C9orf3-219ENST00000488186 CYP4Z2PQ8N1L4 340 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 TRIML2Q8N7C3 387 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 C17orf47Q8NEP4 570 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 OR56A1Q8NGH5 318 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 OR9I1Q8NGQ6 314 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 ADIPOR1Q96A54 375 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 PNPLA2Q96AD5 504 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 HSPBAP1Q96EW2 488 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 PANX1Q96RD7 426 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 CXorf36Q9H7Y0 433 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 BTNL2Q9UIR0 455 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 FAF1Q9UNN5 650 aaPredicted RBP14.55□□□□□ -0.08
C9orf3-219ENST00000488186 DTX4Q9Y2E6 619 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 ZNF462Q96JM2 2506 aa14.55□□□□□ -0.08
C9orf3-219ENST00000488186 FRG2CA6NGY1 282 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 CCDC154A6NI56 674 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 TTC36A6NLP5 189 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms