RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 FIGNL1Q6PIW4 674 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 PRR23CQ6ZRP0 262 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 RNF165Q6ZSG1 346 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 LHFPL3Q86UP9 236 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 C12orf40Q86WS4 652 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 UBE2J2Q8N2K1 259 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 SFXN5Q8TD22 340 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 TRIM63Q969Q1 353 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 TM4SF18Q96CE8 201 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 FAM46AQ96IP4 442 aaKnown RBP11.16□□□□□ -0.62
TRA2B-214ENST00000487615 SECISBP2Q96T21 854 aaKnown RBP11.16□□□□□ -0.62
TRA2B-214ENST00000487615 ACTR10Q9NZ32 417 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 N6AMT1Q9Y5N5 214 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 SCDO00767 359 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 ANKRD28O15084 1053 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 TNFRSF21O75509 655 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 TFPIP10646 304 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 RCVRNP35243 200 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 ISL1P61371 349 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 HYAL2Q12891 473 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 CAMK1Q14012 370 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 RPL13AP3Q6NVV1 102 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 ZNF550Q7Z398 422 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 GHDCQ8N2G8 530 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 C5orf34Q96MH7 638 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 OR4K3Q96R72 315 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 BARD1Q99728 777 aaKnown RBP11.16□□□□□ -0.62
TRA2B-214ENST00000487615 ING3Q9NXR8 418 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 AKAP7Q9P0M2 348 aaPredicted RBP11.16□□□□□ -0.62
TRA2B-214ENST00000487615 EP400Q96L91 3159 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 ISPDA4D126 451 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 TAF4O00268 1085 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 FRS3O43559 492 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 SLITRK5O94991 958 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 ETHE1O95571 254 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 THEGLP0DJG4 465 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 ATP5A1P25705 553 aaKnown RBP11.16□□□□□ -0.62
TRA2B-214ENST00000487615 CSRP3P50461 194 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 PPP5CP53041 499 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 RAB14P61106 215 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 CSNK1G2P78368 415 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 HNRNPA0Q13151 305 aaKnown RBP11.16□□□□□ -0.62
TRA2B-214ENST00000487615 NFATC4Q14934 902 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 PON3Q15166 354 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 NRMQ8IXM6 262 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 LRRC17Q8N6Y2 441 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 ZNF784Q8NCA9 323 aaPredicted RBP11.16□□□□□ -0.62
TRA2B-214ENST00000487615 OR51A7Q8NH64 312 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 TBL1XR1Q9BZK7 514 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 SLC22A4Q9H015 551 aa11.16□□□□□ -0.62
TRA2B-214ENST00000487615 CNOT2Q9NZN8 540 aaKnown RBP11.16□□□□□ -0.62
TRA2B-214ENST00000487615 HEMK1Q9Y5R4 338 aaPredicted RBP11.16□□□□□ -0.62
TRA2B-214ENST00000487615 JUNBP17275 347 aaPredicted RBP11.15□□□□□ -0.62
TRA2B-214ENST00000487615 TNFRSF4P43489 277 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 KIAA0040Q15053 153 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 C11orf88Q6PI97 169 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 COQ7Q99807 217 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 SMIM30A4D0T7 59 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 UNC119BA6NIH7 251 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 J3QLW9 94 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 AIFM1O95831 613 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 F3P13726 295 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 ZNF19P17023 458 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 HK1P19367 917 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 OR2B6P58173 313 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 E2F2Q14209 437 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 SPCS2Q15005 226 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 ZNF852Q6ZMS4 543 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 Q6ZSR6 202 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 DEFB119Q8N690 84 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 OR2L3Q8NG85 312 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 RPLP0P6Q8NHW5 317 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 PHOSPHO1Q8TCT1 267 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 PRAMEF33A0A0G2JMD5 474 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 HYKKA2RU49 373 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 PRAMEF10O60809 474 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 CPNE3O75131 537 aaKnown RBP11.15□□□□□ -0.62
TRA2B-214ENST00000487615 ENTPD6O75354 484 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 SEC14L2O76054 403 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 SLC2A2P11168 524 aaPredicted RBP11.15□□□□□ -0.62
TRA2B-214ENST00000487615 CHMP24386 653 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 MAGEA8P43361 318 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 EPHA5P54756 1037 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 RAB25P57735 213 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 GPNMBQ14956 572 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 TAF13Q15543 124 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 PAMR1Q6UXH9 720 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 DNAJC22Q8N4W6 341 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 CDRT4Q8N9R6 151 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 GGHQ92820 318 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 SLC41A3Q96GZ6 507 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 TMEM121BQ9BXQ6 578 aaPredicted RBP11.15□□□□□ -0.62
TRA2B-214ENST00000487615 TRIM2Q9C040 744 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 STUB1Q9UNE7 303 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 GPR52Q9Y2T5 361 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 CMAHPQ9Y471 501 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 SBF1O95248 1867 aa11.15□□□□□ -0.62
TRA2B-214ENST00000487615 TRAPPC13A5PLN9 417 aa11.15□□□□□ -0.63
TRA2B-214ENST00000487615 APBB3O95704 486 aa11.15□□□□□ -0.63
TRA2B-214ENST00000487615 MT-ND5P03915 603 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms