RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 IDO1P14902 403 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 SOAT1P35610 550 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 FRKP42685 505 aaPredicted RBP10.94□□□□□ -0.66
HPS4-214ENST00000485842 KIR3DL1P43629 444 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 NRG3P56975 720 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 UFM1P61960 85 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 PMP22Q01453 160 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 TLE1Q04724 770 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 INPP5JQ15735 1006 aaPredicted RBP10.94□□□□□ -0.66
HPS4-214ENST00000485842 MAPKAPK3Q16644 382 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 FAM174BQ3ZCQ3 159 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 SPANXN4Q5MJ08 99 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 SLC25A25Q6KCM7 469 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 RTL4Q6ZR62 310 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 GALNTL5Q7Z4T8 443 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 MDGA2Q7Z553 956 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 ZNF605Q86T29 641 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 ZNF227Q86WZ6 799 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 GPALPP1Q8IXQ4 340 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 FAM13CQ8NE31 585 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 OR5M3Q8NGP4 307 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 CPT1CQ8TCG5 803 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 ADIPOR1Q96A54 375 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 TP53INP1Q96A56 240 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 COQ8BQ96D53 544 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 SPACA9Q96E40 222 aaPredicted RBP10.94□□□□□ -0.66
HPS4-214ENST00000485842 ZBTB18Q99592 522 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 TRIM45Q9H8W5 580 aaPredicted RBP10.94□□□□□ -0.66
HPS4-214ENST00000485842 TIMMDC1Q9NPL8 285 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 FGFR1OP2Q9NVK5 253 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 TAS2R9Q9NYW1 312 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 DCTN4Q9UJW0 460 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 SNX8Q9Y5X2 465 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 GPR45Q9Y5Y3 372 aa10.94□□□□□ -0.66
HPS4-214ENST00000485842 CFAP46Q8IYW2 2715 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 G3V3Y1 287 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 CDK2AP1O14519 115 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 EMC8O43402 210 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 NME2P1O60361 137 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 SP1P08047 785 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 FBXO45P0C2W1 286 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 NME2P22392 152 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 MDH1P40925 334 aaKnown RBP10.93□□□□□ -0.66
HPS4-214ENST00000485842 PRKAG1P54619 331 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 CORO7P57737 925 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 GPR85P60893 370 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 DCAF7P61962 342 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 PLCXD2Q0VAA5 305 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 SF3A3Q12874 501 aaKnown RBP eCLIP10.93□□□□□ -0.669e-7■■■■□ 22
HPS4-214ENST00000485842 GSTA3Q16772 222 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 SPDYE7PQ495Y7 208 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 PDCD4Q53EL6 469 aaKnown RBP10.93□□□□□ -0.66
HPS4-214ENST00000485842 FAM180AQ6UWF9 173 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 LYPD8Q6UX82 237 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 WDR53Q7Z5U6 358 aaPredicted RBP10.93□□□□□ -0.66
HPS4-214ENST00000485842 CAMKMTQ7Z624 323 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 ANKRD46Q86W74 232 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 CLECL1Q8IZS7 167 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 OR2L13Q8N349 312 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 SLC15A4Q8N697 577 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 NATD1Q8N6N6 113 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 PSD4Q8NDX1 1056 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 C17orf47Q8NEP4 570 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 NUP43Q8NFH3 380 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 RFWD2Q8NHY2 731 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 FBXO30Q8TB52 745 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 OR5P2Q8WZ92 322 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 TESCQ96BS2 214 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 SNRNP40Q96DI7 357 aaKnown RBP10.93□□□□□ -0.66
HPS4-214ENST00000485842 SCMH1Q96GD3 660 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 LCORQ96JN0 433 aaPredicted RBP10.93□□□□□ -0.66
HPS4-214ENST00000485842 TEX37Q96LM6 180 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 VSTM2LQ96N03 204 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 CLMPQ9H6B4 373 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 CXorf36Q9H7Y0 433 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 SIRT3Q9NTG7 399 aaPredicted RBP10.93□□□□□ -0.66
HPS4-214ENST00000485842 ZCCHC3Q9NUD5 404 aaKnown RBP10.93□□□□□ -0.66
HPS4-214ENST00000485842 NTNG1Q9Y2I2 539 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 NPFFR2Q9Y5X5 522 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 COPG1Q9Y678 874 aaKnown RBP10.93□□□□□ -0.66
HPS4-214ENST00000485842 EXPH5Q8NEV8 1989 aa10.93□□□□□ -0.66
HPS4-214ENST00000485842 A0A0G2JND7 137 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 FRG2CA6NGY1 282 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 PYCARD-AS1I3L0S3 204 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 SLC22A3O75751 556 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 RASAL1O95294 804 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 CPSF4O95639 269 aaKnown RBP10.92□□□□□ -0.66
HPS4-214ENST00000485842 IFI6P09912 130 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 CCL3P10147 92 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 TROVE2P10155 538 aaKnown RBP eCLIP10.92□□□□□ -0.66
HPS4-214ENST00000485842 ABCD3P28288 659 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 IL12AP29459 219 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 S100A3P33764 101 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 PPICP45877 212 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 TMED10P49755 219 aaKnown RBP10.92□□□□□ -0.66
HPS4-214ENST00000485842 DGKQP52824 942 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 WNT3P56703 355 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 STX1BP61266 288 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 PRR5P85299 388 aa10.92□□□□□ -0.66
HPS4-214ENST00000485842 SRSF11Q05519 484 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms