RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 UFM1P61960 85 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 GNGT1P63211 74 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 MAPRE2Q15555 327 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 MAPKAPK3Q16644 382 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 FAM174BQ3ZCQ3 159 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 CYP27C1Q4G0S4 372 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 ZNF628Q5EBL2 1059 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 PIGGQ5H8A4 983 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 B3GNTL1Q67FW5 361 aaPredicted RBP7.67□□□□□ -1.18
SF3A1-208ENST00000485618 TMEM107Q6UX40 140 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 TMEM64Q6YI46 380 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 SZRD1Q7Z422 152 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 MMP21Q8N119 569 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 KRTCAP2Q8N6L1 136 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 ZNF615Q8N8J6 731 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 CDRT4Q8N9R6 151 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 TMEM178AQ8NBL3 297 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 DNAJB8Q8NHS0 232 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 THAP3Q8WTV1 239 aaPredicted RBP7.67□□□□□ -1.18
SF3A1-208ENST00000485618 TSPEARQ8WU66 669 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 PSMF1Q92530 271 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 KAT2AQ92830 837 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 UCN3Q969E3 161 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 PNPLA2Q96AD5 504 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 LCORQ96JN0 433 aaPredicted RBP7.67□□□□□ -1.18
SF3A1-208ENST00000485618 OR52B2Q96RD2 323 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 WWTR1Q9GZV5 400 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 GLIPR2Q9H4G4 154 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 Q9N2J8 555 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 HPF1Q9NWY4 346 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 MAT2BQ9NZL9 334 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 LRFN1Q9P244 771 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 ZNF639Q9UID6 485 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 BTNL2Q9UIR0 455 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 C19orf53Q9UNZ5 99 aaPredicted RBP7.67□□□□□ -1.18
SF3A1-208ENST00000485618 EXO1Q9UQ84 846 aaKnown RBP7.67□□□□□ -1.18
SF3A1-208ENST00000485618 PCDHGB6Q9Y5F9 930 aa7.67□□□□□ -1.18
SF3A1-208ENST00000485618 CCDC154A6NI56 674 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 KLRC4-KLRK1H3BQV0 150 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 WWP2O00308 870 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 RFXANKO14593 260 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 SLC22A2O15244 555 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 KCNH1O95259 989 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 ANP32DO95626 131 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 KRT75O95678 551 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 WDPCPO95876 746 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 ALOX5P09917 674 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 SSTR4P31391 388 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 LSP1P33241 339 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 CHI3L1P36222 383 aaPredicted RBP7.66□□□□□ -1.18
SF3A1-208ENST00000485618 CD96P40200 585 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 FRKP42685 505 aaPredicted RBP7.66□□□□□ -1.18
SF3A1-208ENST00000485618 TRPC1P48995 793 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 CCT3P49368 545 aaKnown RBP7.66□□□□□ -1.18
SF3A1-208ENST00000485618 TNFSF10P50591 281 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 NR0B1P51843 470 aaKnown RBP7.66□□□□□ -1.18
SF3A1-208ENST00000485618 FOXK1P85037 733 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 MGAT2Q10469 447 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 ZNF155Q12901 538 aaPredicted RBP7.66□□□□□ -1.18
SF3A1-208ENST00000485618 EFR3AQ14156 821 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 UBAP2LQ14157 1087 aaKnown RBP7.66□□□□□ -1.18
SF3A1-208ENST00000485618 ZNF169Q14929 603 aaPredicted RBP7.66□□□□□ -1.18
SF3A1-208ENST00000485618 IGFBP7Q16270 282 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 INAQ16352 499 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 ZNF750Q32MQ0 723 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 TRMT12Q53H54 448 aaKnown RBP7.66□□□□□ -1.18
SF3A1-208ENST00000485618 TBCELQ5QJ74 424 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 ATAD3BQ5T9A4 648 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 FCRLBQ6BAA4 426 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 ANKRD26P1Q6NSI1 321 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 FAM111BQ6SJ93 734 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 RTL4Q6ZR62 310 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 ZNF551Q7Z340 670 aaPredicted RBP7.66□□□□□ -1.18
SF3A1-208ENST00000485618 SPATA21Q7Z572 469 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 SHISA5Q8N114 240 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 CYP4Z2PQ8N1L4 340 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 BEST3Q8N1M1 668 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 OR2L13Q8N349 312 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 KIF2BQ8N4N8 673 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 GOLM1Q8NBJ4 401 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 NUP43Q8NFH3 380 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 OR4A15Q8NGL6 344 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 C16orf52Q8NHV5 167 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 PSMA8Q8TAA3 256 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 SFXN5Q8TD22 340 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 CIDECQ96AQ7 238 aaPredicted RBP7.66□□□□□ -1.18
SF3A1-208ENST00000485618 MAGED4Q96JG8 741 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 MS4A4EQ96PG1 132 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 ZNF317Q96PQ6 595 aaPredicted RBP7.66□□□□□ -1.18
SF3A1-208ENST00000485618 PANX1Q96RD7 426 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 SECISBP2Q96T21 854 aaKnown RBP7.66□□□□□ -1.18
SF3A1-208ENST00000485618 MESP1Q9BRJ9 268 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 TMEM120AQ9BXJ8 343 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 AGPAT4Q9NRZ5 378 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 ZCCHC3Q9NUD5 404 aaKnown RBP7.66□□□□□ -1.18
SF3A1-208ENST00000485618 THUMPD1Q9NXG2 353 aaKnown RBP7.66□□□□□ -1.18
SF3A1-208ENST00000485618 CNIH4Q9P003 139 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 VPS4AQ9UN37 437 aa7.66□□□□□ -1.18
SF3A1-208ENST00000485618 KLF13Q9Y2Y9 288 aaPredicted RBP7.66□□□□□ -1.18
SF3A1-208ENST00000485618 BSNQ9UPA5 3926 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms