RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 FAM199XQ6PEV8 388 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 ZNF517Q6ZMY9 492 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 PAGE2Q7Z2X7 111 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 TIPARPQ7Z3E1 657 aaKnown RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 GPR180Q86V85 440 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 MIER2Q8N344 545 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 TMEM132CQ8N3T6 1108 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 AMER2Q8N7J2 671 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 FAM47BQ8NA70 645 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 OR51Q1Q8NH59 317 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 WDR36Q8NI36 951 aaKnown RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 CLIP3Q96DZ5 547 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 MVB12AQ96EY5 273 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 SLC46A1Q96NT5 459 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 SMAD5Q99717 465 aaKnown RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 MESP1Q9BRJ9 268 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 NDC1Q9BTX1 674 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 CLMPQ9H6B4 373 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 COPS7BQ9H9Q2 264 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 MYNNQ9NPC7 610 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 SLAMF7Q9NQ25 335 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 CTSFQ9UBX1 484 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 CES1P1Q9UKY3 287 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 WASF3Q9UPY6 502 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 CEP250Q9BV73 2442 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 MYOCOSA0A1B0GUC4 107 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 TMX2-CTNND1H3BSU7 103 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 FBP2O00757 339 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 SCAMP2O15127 329 aaKnown RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 GYG2O15488 501 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 CCDC22O60826 627 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 SLC22A3O75751 556 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 PDE5AO76074 875 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 STK17BO94768 372 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 MYO1DO94832 1006 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 TNFSF15O95150 251 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 C1QCP02747 245 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 LAMP1P11279 417 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 DDCP20711 480 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 EFNA1P20827 205 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 PRPS1L1P21108 318 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 PIK3R1P27986 724 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 PTPN4P29074 926 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 PTGER1P34995 402 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 MSX2P35548 267 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 CPOXP36551 454 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 PLA2G5P39877 138 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 XCR1P46094 333 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 WNT3P56703 355 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 C21orf58P58505 322 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 LINC00310P59036 64 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 BTG2P78543 158 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 TNFRSF17Q02223 184 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 TGM3Q08188 693 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 C2orf80Q0P641 193 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 ABHD18Q0P651 414 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 PDE7AQ13946 482 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 RCAN2Q14206 197 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 KRT72Q14CN4 511 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 PDCD1Q15116 288 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 FAM174BQ3ZCQ3 159 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 AGKQ53H12 422 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 DCAF12Q5T6F0 453 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 FAM91A1Q658Y4 838 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 PRMT9Q6P2P2 845 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 CEACAM20Q6UY09 585 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 ZBTB46Q86UZ6 589 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 PROSER1Q86XN7 944 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 TICAM1Q8IUC6 712 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 OR4N5Q8IXE1 308 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 DSELQ8IZU8 1212 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 DNAJB14Q8TBM8 379 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 CIDECQ96AQ7 238 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 VPS33AQ96AX1 596 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 CNRIP1Q96F85 164 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 TAAR9Q96RI9 348 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 FOXB1Q99853 325 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 BTBD10Q9BSF8 475 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 DDA1Q9BW61 102 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 NPLQ9BXD5 320 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 ULBP3Q9BZM4 244 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 DPY30Q9C005 99 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 REEP4Q9H6H4 257 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 ZNF304Q9HCX3 659 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 LYRM4Q9HD34 91 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 LANCL2Q9NS86 450 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 ZIM2Q9NZV7 527 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 AKAP7Q9P0M2 348 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 PCDHGA3Q9Y5H0 932 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 SPTBP11277 2137 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 IGLV3-12A0A075B6K2 115 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 A0A088AWK7 358 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 C1orf226A1L170 272 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 CFAP73A6NFT4 308 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 CDRT15L2A8MXV6 281 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 NR5A2O00482 541 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 FGF17O60258 216 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 LDB3O75112 727 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 BMP10O95393 424 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 ONECUT2O95948 504 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms