RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 PRAMEF9Q5VWM5 478 aa10.77□□□□□ -0.69
LSM2-209ENST00000470083 ANKRD22Q5VYY1 191 aa10.77□□□□□ -0.69
LSM2-209ENST00000470083 C18orf63Q68DL7 685 aa10.77□□□□□ -0.69
LSM2-209ENST00000470083 CLEC2AQ6UVW9 174 aa10.77□□□□□ -0.69
LSM2-209ENST00000470083 IL17RELQ6ZVW7 336 aa10.77□□□□□ -0.69
LSM2-209ENST00000470083 NUP54Q7Z3B4 507 aa10.77□□□□□ -0.69
LSM2-209ENST00000470083 GPR180Q86V85 440 aa10.77□□□□□ -0.69
LSM2-209ENST00000470083 PLCZ1Q86YW0 608 aa10.77□□□□□ -0.69
LSM2-209ENST00000470083 ZNF615Q8N8J6 731 aa10.77□□□□□ -0.69
LSM2-209ENST00000470083 SGMS2Q8NHU3 365 aa10.77□□□□□ -0.69
LSM2-209ENST00000470083 FNDC9Q8TBE3 224 aa10.77□□□□□ -0.69
LSM2-209ENST00000470083 WDR34Q96EX3 536 aa10.77□□□□□ -0.69
LSM2-209ENST00000470083 TRAF4Q9BUZ4 470 aaPredicted RBP10.77□□□□□ -0.69
LSM2-209ENST00000470083 NTMT1Q9BV86 223 aa10.77□□□□□ -0.69
LSM2-209ENST00000470083 ALG2Q9H553 416 aa10.77□□□□□ -0.69
LSM2-209ENST00000470083 CXorf21Q9HAI6 301 aa10.77□□□□□ -0.69
LSM2-209ENST00000470083 XAB2Q9HCS7 855 aaKnown RBP10.77□□□□□ -0.69
LSM2-209ENST00000470083 PHF11Q9UIL8 331 aa10.77□□□□□ -0.69
LSM2-209ENST00000470083 FBXL2Q9UKC9 423 aa10.77□□□□□ -0.69
LSM2-209ENST00000470083 MRPS18CQ9Y3D5 142 aaKnown RBP10.77□□□□□ -0.69
LSM2-209ENST00000470083 EPN1Q9Y6I3 576 aaPredicted RBP10.77□□□□□ -0.69
LSM2-209ENST00000470083 PRAMEF25A6NGN4 478 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 ZIC3O60481 467 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 PRKRAO75569 313 aaKnown RBP10.76□□□□□ -0.69
LSM2-209ENST00000470083 AIFM1O95831 613 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 CD8AP01732 235 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 AHSGP02765 367 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 CD3EP07766 207 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 SLC35E2BP0CK96 405 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 SLC35E2P0CK97 266 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 PEPDP12955 493 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 SLC25A16P16260 332 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 CD22P20273 847 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 HNF1AP20823 631 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 CNTFP26441 200 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 DPP4P27487 766 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 TERF1P54274 439 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 CLDN15P56746 228 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 EEFSECP57772 596 aaKnown RBP10.76□□□□□ -0.69
LSM2-209ENST00000470083 ZNF844Q08AG5 666 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 DESI1Q6ICB0 168 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 DTX2Q86UW9 622 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 UBQLNLQ8IYU4 475 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 AGGF1Q8N302 714 aaeCLIP10.76□□□□□ -0.69
LSM2-209ENST00000470083 RFLNBQ8N5W9 214 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 ZNF473Q8WTR7 871 aaKnown RBP10.76□□□□□ -0.69
LSM2-209ENST00000470083 NEUROG1Q92886 237 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 PTCD3Q96EY7 689 aaKnown RBP10.76□□□□□ -0.69
LSM2-209ENST00000470083 TACO1Q9BSH4 297 aaKnown RBP10.76□□□□□ -0.69
LSM2-209ENST00000470083 EFCAB11Q9BUY7 163 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 PINK1Q9BXM7 581 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 NXF5Q9H1B4 397 aaKnown RBP10.76□□□□□ -0.69
LSM2-209ENST00000470083 OR10A5Q9H207 317 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 FANCFQ9NPI8 374 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 PLSCR4Q9NRQ2 329 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 WHRNQ9P202 907 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 DKKL1Q9UK85 242 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 KCNS2Q9ULS6 477 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 OARD1Q9Y530 152 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 PRR14LQ5THK1 2151 aa10.76□□□□□ -0.69
LSM2-209ENST00000470083 ALPK2Q86TB3 2170 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.75□□□□□ -0.69
LSM2-209ENST00000470083 NPEPPSL1A6NEC2 478 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 CLGNO14967 610 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 TCF21O43680 179 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 FESP07332 822 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 FCGR2AP12318 317 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 PSMB1P20618 241 aaKnown RBP10.75□□□□□ -0.69
LSM2-209ENST00000470083 GPX3P22352 226 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 BUD31P41223 144 aaPredicted RBP10.75□□□□□ -0.69
LSM2-209ENST00000470083 MAGEA3P43357 314 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 HNRNPH2P55795 449 aaKnown RBP10.75□□□□□ -0.69
LSM2-209ENST00000470083 B3GALT5-AS1P59052 145 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 HMGCS1Q01581 520 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 KIF5AQ12840 1032 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 DOC2AQ14183 400 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 PON3Q15166 354 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 KCTD19Q17RG1 926 aaPredicted RBP10.75□□□□□ -0.69
LSM2-209ENST00000470083 PDLIM3Q53GG5 364 aaPredicted RBP10.75□□□□□ -0.69
LSM2-209ENST00000470083 PAGE2BQ5JRK9 111 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 NCMAPQ5T1S8 102 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 OR4C11Q6IEV9 310 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 FAM166AQ6J272 317 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 GALNT7Q86SF2 657 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 CNTN4Q8IWV2 1026 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 GALNT12Q8IXK2 581 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 MCUQ8NE86 351 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 OR6K3Q8NGY3 331 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 OMA1Q96E52 524 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 SORBS1Q9BX66 1292 aaKnown RBP10.75□□□□□ -0.69
LSM2-209ENST00000470083 CHODLQ9H9P2 273 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 DNAJC11Q9NVH1 559 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 GPR52Q9Y2T5 361 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 VWA7Q9Y334 891 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 EMC9Q9Y3B6 208 aa10.75□□□□□ -0.69
LSM2-209ENST00000470083 UQCRHLA0A096LP55 91 aa10.74□□□□□ -0.69
LSM2-209ENST00000470083 SLC35F4A4IF30 521 aa10.74□□□□□ -0.69
LSM2-209ENST00000470083 WASHC1A8K0Z3 465 aa10.74□□□□□ -0.69
LSM2-209ENST00000470083 H0YC42 278 aa10.74□□□□□ -0.69
LSM2-209ENST00000470083 SAP18O00422 153 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms