RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 SLC30A4O14863 429 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 ADRA2AP08913 450 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 TIMP2P16035 220 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 HOXB9P17482 250 aaPredicted RBP17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 MAPK1P28482 360 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 SSTR2P30874 369 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 HNMTP50135 292 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 WNT3P56703 355 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 ZNF57Q68EA5 555 aaPredicted RBP17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 FAM180BQ6P0A1 224 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 CNIH2Q6PI25 160 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 RASSF6Q6ZTQ3 369 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 CBLL1Q75N03 491 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 SERPINA11Q86U17 422 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 OR11H7Q8NGC8 314 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 YIPF5Q969M3 257 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 MS4A7Q9GZW8 240 aaPredicted RBP17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 SPHK2Q9NRA0 654 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 TDP1Q9NUW8 608 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 VPS29Q9UBQ0 182 aa17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 LSM2Q9Y333 95 aaKnown RBP17.09■□□□□ 0.33
SNAPC3-205ENST00000467062 ABHD14A-ACY1A0A1B0GW23 586 aa17.08■□□□□ 0.33
SNAPC3-205ENST00000467062 M0R233 179 aa17.08■□□□□ 0.33
SNAPC3-205ENST00000467062 PSIP1O75475 530 aaKnown RBP17.08■□□□□ 0.33
SNAPC3-205ENST00000467062 KCNK5O95279 499 aa17.08■□□□□ 0.33
SNAPC3-205ENST00000467062 CFDP00746 253 aaPredicted RBP17.08■□□□□ 0.33
SNAPC3-205ENST00000467062 JUPP14923 745 aa17.08■□□□□ 0.33
SNAPC3-205ENST00000467062 POLR2LP62875 67 aaKnown RBP17.08■□□□□ 0.33
SNAPC3-205ENST00000467062 IL18Q14116 193 aa17.08■□□□□ 0.33
SNAPC3-205ENST00000467062 IER5LQ5T953 404 aa17.08■□□□□ 0.33
SNAPC3-205ENST00000467062 CD276Q5ZPR3 534 aa17.08■□□□□ 0.33
SNAPC3-205ENST00000467062 AGTRAPQ6RW13 159 aa17.08■□□□□ 0.33
SNAPC3-205ENST00000467062 ADGRF3Q8IZF5 1079 aa17.08■□□□□ 0.33
SNAPC3-205ENST00000467062 TRIM43Q96BQ3 446 aaPredicted RBP17.08■□□□□ 0.33
SNAPC3-205ENST00000467062 TPD52L3Q96J77 140 aa17.08■□□□□ 0.33
SNAPC3-205ENST00000467062 SEC22CQ9BRL7 303 aa17.08■□□□□ 0.33
SNAPC3-205ENST00000467062 PRR14Q9BWN1 585 aa17.08■□□□□ 0.33
SNAPC3-205ENST00000467062 RBCK1Q9BYM8 510 aa17.08■□□□□ 0.33
SNAPC3-205ENST00000467062 ZDHHC4Q9NPG8 344 aa17.08■□□□□ 0.33
SNAPC3-205ENST00000467062 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.08■□□□□ 0.33
SNAPC3-205ENST00000467062 TXNL4BQ9NX01 149 aaKnown RBP17.08■□□□□ 0.33
SNAPC3-205ENST00000467062 SCN2BO60939 215 aa17.08■□□□□ 0.32
SNAPC3-205ENST00000467062 ATP12AP54707 1039 aa17.08■□□□□ 0.32
SNAPC3-205ENST00000467062 PTPN5P54829 565 aa17.08■□□□□ 0.32
SNAPC3-205ENST00000467062 MEF2AQ02078 507 aaPredicted RBP17.08■□□□□ 0.32
SNAPC3-205ENST00000467062 DOC2BQ14184 412 aa17.08■□□□□ 0.32
SNAPC3-205ENST00000467062 SYTL3Q4VX76 610 aa17.08■□□□□ 0.32
SNAPC3-205ENST00000467062 FAM209BQ5JX69 171 aa17.08■□□□□ 0.32
SNAPC3-205ENST00000467062 ABI3BPQ7Z7G0 1075 aa17.08■□□□□ 0.32
SNAPC3-205ENST00000467062 CHCHD4Q8N4Q1 142 aa17.08■□□□□ 0.32
SNAPC3-205ENST00000467062 C2orf73Q8N5S3 287 aaPredicted RBP17.08■□□□□ 0.32
SNAPC3-205ENST00000467062 OR8D4Q8NGM9 314 aa17.08■□□□□ 0.32
SNAPC3-205ENST00000467062 COQ10AQ96MF6 247 aa17.08■□□□□ 0.32
SNAPC3-205ENST00000467062 NRTNQ99748 197 aa17.08■□□□□ 0.32
SNAPC3-205ENST00000467062 MED18Q9BUE0 208 aa17.08■□□□□ 0.32
SNAPC3-205ENST00000467062 SGK2Q9HBY8 427 aa17.08■□□□□ 0.32
SNAPC3-205ENST00000467062 A0A1B0GVI7 797 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 ANTXRLA6NF34 631 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 TNFRSF11BO00300 401 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 TPST2O60704 377 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 MOSPD3O75425 235 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 C4BPBP20851 252 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 VMACQ2NL98 169 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 PLEKHS1Q5SXH7 462 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 PDE12Q6L8Q7 609 aaKnown RBP17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 ANGPTL8Q6UXH0 198 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 OR10G2Q8NGC3 310 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 MND1Q9BWT6 205 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 ZNF436Q9C0F3 470 aaPredicted RBP17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 B3GAT2Q9NPZ5 323 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 SPTBN5Q9NRC6 3674 aaKnown RBP17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 C7orf66A4D0T2 115 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 GABRR3A8MPY1 467 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 K7ESM1 405 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 CSO75390 466 aaKnown RBP17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 S100A6P06703 90 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 FCER2P06734 321 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 CLTBP09497 229 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 XPAP23025 273 aaPredicted RBP17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 ACSM2AQ08AH3 577 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 GGTA1PQ4G0N0 100 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 ACSM2BQ68CK6 577 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 ZNF704Q6ZNC4 412 aaPredicted RBP17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 SLC5A8Q8N695 610 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 TMEM159Q96B96 161 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 ERMAPQ96PL5 475 aaPredicted RBP17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 POLR2J2Q9GZM3 115 aaKnown RBP17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 STOX2Q9P2F5 926 aaPredicted RBP17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 SH2B3Q9UQQ2 575 aa17.07■□□□□ 0.32
SNAPC3-205ENST00000467062 AKAP8O43823 692 aaKnown RBP17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 MMP20O60882 483 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 ADH1AP07327 375 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 SYN1P17600 705 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 TNFRSF1BP20333 461 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 PRPS1L1P21108 318 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 DNASE1P24855 282 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 POU1F1P28069 291 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 C1DQ13901 141 aaKnown RBP17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 DUOXA1Q1HG43 343 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 BCL2L15Q5TBC7 163 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms