RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 CERS1P27544 350 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 PCGF2P35227 344 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 RPA4Q13156 261 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 ENPP2Q13822 863 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 PUM1Q14671 1186 aaKnown RBP eCLIP8.61□□□□□ -1.03
HPS4-208ENST00000464362 NKG7Q16617 165 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 EIPR1Q53HC9 387 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 IL20RBQ6UXL0 311 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 GALNT7Q86SF2 657 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 PHC2Q8IXK0 858 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 MMP21Q8N119 569 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 CBARPQ8N350 705 aaPredicted RBP8.61□□□□□ -1.03
HPS4-208ENST00000464362 ACBD7Q8N6N7 88 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 YIPF7Q8N8F6 280 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 OR4F15Q8NGB8 312 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 OR4K14Q8NGD5 310 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 OR8S1Q8NH09 359 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 FANK1Q8TC84 345 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 CHPT1Q8WUD6 406 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 SLC38A3Q99624 504 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 DPH1Q9BZG8 443 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 DPAGT1Q9H3H5 408 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 RDH14Q9HBH5 336 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 GPN1Q9HCN4 374 aaPredicted RBP8.61□□□□□ -1.03
HPS4-208ENST00000464362 SRA1Q9HD15 236 aaKnown RBP8.61□□□□□ -1.03
HPS4-208ENST00000464362 SLC6A13Q9NSD5 602 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 RDH8Q9NYR8 311 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 USP36Q9P275 1121 aaKnown RBP8.61□□□□□ -1.03
HPS4-208ENST00000464362 UNCXA6NJT0 531 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 TMEM189-UBE2V1I3L0A0 370 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 SEC14L2O76054 403 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 IGFBP1P08833 259 aaPredicted RBP8.61□□□□□ -1.03
HPS4-208ENST00000464362 FAUP35544 74 aaKnown RBP8.61□□□□□ -1.03
HPS4-208ENST00000464362 AHRP35869 848 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 HTR2BP41595 481 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 VSX2P58304 361 aaPredicted RBP8.61□□□□□ -1.03
HPS4-208ENST00000464362 YBX1P67809 324 aaKnown RBP8.61□□□□□ -1.03
HPS4-208ENST00000464362 ZNF91Q05481 1191 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 LRIT3Q3SXY7 679 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 LRRC37A5PQ49AS3 106 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 SCGB2B2Q4G0G5 96 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 BCL2L15Q5TBC7 163 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 PNCKQ6P2M8 343 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 TMC8Q8IU68 726 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 ENTHD1Q8IYW4 607 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 ANKK1Q8NFD2 765 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 OR4K13Q8NH42 304 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 TESCQ96BS2 214 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 PDLIM5Q96HC4 596 aaKnown RBP8.61□□□□□ -1.03
HPS4-208ENST00000464362 HSPA12BQ96MM6 686 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 OR8D2Q9GZM6 311 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 CPNE5Q9HCH3 593 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 AKAP7Q9P0M2 348 aaPredicted RBP8.61□□□□□ -1.03
HPS4-208ENST00000464362 STOML2Q9UJZ1 356 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 PHIPQ8WWQ0 1821 aa8.61□□□□□ -1.03
HPS4-208ENST00000464362 KIAA1217Q5T5P2 1943 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 FAM47E-STBD1D6RA91 191 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 C11orf98E9PRG8 122 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 ARHGAP33O14559 1287 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 AQP9O43315 295 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 MT-ND5P03915 603 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 CYP17A1P05093 508 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 ADRB3P13945 408 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 HOXB2P14652 356 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 TIMP2P16035 220 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 CRYZQ08257 329 aaKnown RBP8.6□□□□□ -1.03
HPS4-208ENST00000464362 GAB1Q13480 694 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 C6orf132Q5T0Z8 1188 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 MEDAGQ5VYS4 303 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 CNIH2Q6PI25 160 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 LAX1Q8IWV1 398 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 TCEAL8Q8IYN2 117 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 CADM3Q8N126 398 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 DNAJC22Q8N4W6 341 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 BEST4Q8NFU0 473 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 OR9A2Q8NGT5 310 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 WDR20Q8TBZ3 569 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 TSACCQ96A04 125 aaPredicted RBP8.6□□□□□ -1.03
HPS4-208ENST00000464362 MCCC1Q96RQ3 725 aaPredicted RBP8.6□□□□□ -1.03
HPS4-208ENST00000464362 BCL2L14Q9BZR8 327 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 KLHL31Q9H511 634 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 IL21RQ9HBE5 538 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 HRASLS2Q9NWW9 162 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 CLEC2DQ9UHP7 191 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 FBXL21Q9UKT6 434 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 CEP250Q9BV73 2442 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 LOC102723532A0A0G2JNH3 316 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 ANTXRLA6NF34 631 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 EIF1AYO14602 144 aaKnown RBP8.6□□□□□ -1.03
HPS4-208ENST00000464362 NCR1O76036 304 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 HSD17B2P37059 387 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 MASP1P48740 699 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 DNASE1L1P49184 302 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 GP2P55259 537 aaKnown RBP8.6□□□□□ -1.03
HPS4-208ENST00000464362 TAS2R38P59533 333 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 DUSP7Q16829 419 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 FLYWCH1Q4VC44 716 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 RBM45Q8IUH3 476 aaKnown RBP8.6□□□□□ -1.03
HPS4-208ENST00000464362 OR2A12Q8NGT7 310 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 RFT1Q96AA3 541 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms