RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 WASHC1A8K0Z3 465 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 PLOD3O60568 738 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 NTN1O95631 604 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 ELFN1P0C7U0 828 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 XPAP23025 273 aaPredicted RBP17.4■□□□□ 0.38
HPS3-204ENST00000462030 CTBP2P56545 445 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 PCBP4P57723 403 aaKnown RBP17.4■□□□□ 0.38
HPS3-204ENST00000462030 MAP4K2Q12851 820 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 PRAMEF14Q5SWL7 426 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 PRAMEF13Q5VWM6 474 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 KIAA1211LQ6NV74 962 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 ADIPOR2Q86V24 386 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 MARCH9Q86YJ5 346 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 ELMOD2Q8IZ81 293 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 ZNF485Q8NCK3 441 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 ZNF689Q96CS4 500 aaPredicted RBP17.4■□□□□ 0.38
HPS3-204ENST00000462030 MARVELD1Q9BSK0 173 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 SAP130Q9H0E3 1048 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 OR2AG1Q9H205 316 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 CLCA2Q9UQC9 943 aa17.4■□□□□ 0.38
HPS3-204ENST00000462030 TRDV1A0A1B0GX56 115 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.39■□□□□ 0.37
HPS3-204ENST00000462030 LILRB5O75023 590 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 IFI30P13284 250 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 CCT3P49368 545 aaKnown RBP17.39■□□□□ 0.37
HPS3-204ENST00000462030 NDUFA9Q16795 377 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 DUSP6Q16828 381 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 LIPIQ6XZB0 460 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 FAM109AQ8N4B1 249 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 ANKK1Q8NFD2 765 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 VN1R2Q8NFZ6 395 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 ANGPTL6Q8NI99 470 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 SUN5Q8TC36 379 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 KCNJ15Q99712 375 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 PRR14Q9BWN1 585 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 GTPBP2Q9BX10 602 aaKnown RBP17.39■□□□□ 0.37
HPS3-204ENST00000462030 ISYNA1Q9NPH2 558 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 NR2F1P10589 423 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 PTGER1P34995 402 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 BSGP35613 385 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 AGFG1P52594 562 aaKnown RBP17.39■□□□□ 0.37
HPS3-204ENST00000462030 MINDY4Q4G0A6 757 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 ENTPD8Q5MY95 495 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 DPPA4Q7L190 304 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 FAM129CQ86XR2 697 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 ARIH2OSQ8N7S6 290 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 ZNF366Q8N895 744 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 PLA2G15Q8NCC3 412 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 UBE2E3Q969T4 207 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 WACQ9BTA9 647 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 SLC46A2Q9BY10 475 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 P2RX2Q9UBL9 471 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 TRPC4Q9UBN4 977 aa17.39■□□□□ 0.37
HPS3-204ENST00000462030 EXOSC1Q9Y3B2 195 aaKnown RBP17.39■□□□□ 0.37
HPS3-204ENST00000462030 K7ESM1 405 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 CACNB4O00305 520 aaPredicted RBP17.38■□□□□ 0.37
HPS3-204ENST00000462030 DVL2O14641 736 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 SLC43A1O75387 559 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 MYCP01106 439 aaPredicted RBP17.38■□□□□ 0.37
HPS3-204ENST00000462030 SLC1A3P43003 542 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 SF3A2Q15428 464 aaKnown RBP17.38■□□□□ 0.37
HPS3-204ENST00000462030 CLEC12AQ5QGZ9 265 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 KHDRBS2Q5VWX1 349 aaKnown RBP17.38■□□□□ 0.37
HPS3-204ENST00000462030 B3GLCTQ6Y288 498 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 ANKRD53Q8N9V6 530 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 OR4F15Q8NGB8 312 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 NEIL3Q8TAT5 605 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 RNF32Q9H0A6 362 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 TEX10Q9NXF1 929 aaPredicted RBP17.38■□□□□ 0.37
HPS3-204ENST00000462030 LAMA2P24043 3122 aaKnown RBP17.38■□□□□ 0.37
HPS3-204ENST00000462030 C2orf92A0A1B0GVN3 265 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 CD8B2A6NJW9 211 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 GABRPO00591 440 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 ORC5O43913 435 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 CD8BP10966 210 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 MMP12P39900 470 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 LRRC32Q14392 662 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 ZNF57Q68EA5 555 aaPredicted RBP17.38■□□□□ 0.37
HPS3-204ENST00000462030 SLC27A4Q6P1M0 643 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 METAP1DQ6UB28 335 aaPredicted RBP17.38■□□□□ 0.37
HPS3-204ENST00000462030 TRILQ7L0X0 811 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 TEX47Q8TBZ9 253 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 RAET1EQ8TD07 263 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 SLC35G5Q96KT7 338 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 AHSPQ9NZD4 102 aa17.38■□□□□ 0.37
HPS3-204ENST00000462030 UBXN7O94888 489 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 CELP19835 753 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 INPP1P49441 399 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 MLLT1Q03111 559 aaPredicted RBP17.37■□□□□ 0.37
HPS3-204ENST00000462030 ZNF155Q12901 538 aaPredicted RBP17.37■□□□□ 0.37
HPS3-204ENST00000462030 MAB21L1Q13394 359 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 CCDC85BQ15834 202 aaPredicted RBP17.37■□□□□ 0.37
HPS3-204ENST00000462030 ZNF791Q3KP31 576 aaPredicted RBP17.37■□□□□ 0.37
HPS3-204ENST00000462030 TMCO2Q7Z6W1 182 aaPredicted RBP17.37■□□□□ 0.37
HPS3-204ENST00000462030 LSRQ86X29 649 aaPredicted RBP17.37■□□□□ 0.37
HPS3-204ENST00000462030 MKRN2Q9H000 416 aaKnown RBP17.37■□□□□ 0.37
HPS3-204ENST00000462030 LHX9Q9NQ69 397 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 CNIH4Q9P003 139 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 SLC23A1Q9UHI7 598 aa17.37■□□□□ 0.37
HPS3-204ENST00000462030 CDH10Q9Y6N8 788 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms