RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 WBP11Q9Y2W2 641 aaKnown RBP13.66□□□□□ -0.22
HDAC4-204ENST00000446876 NPFFR2Q9Y5X5 522 aa13.66□□□□□ -0.22
HDAC4-204ENST00000446876 CHCHD2Q9Y6H1 151 aaPredicted RBP13.66□□□□□ -0.22
HDAC4-204ENST00000446876 USP9XQ93008 2570 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-204ENST00000446876 PDPK1O15530 556 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 CNR1P21554 472 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 ABCD3P28288 659 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 RPL14P50914 215 aaKnown RBP13.65□□□□□ -0.22
HDAC4-204ENST00000446876 CORO7P57737 925 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 GTF3C1Q12789 2109 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 HSPB3Q12988 150 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 PDE7AQ13946 482 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 PTGR1Q14914 329 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 NTRK2Q16620 822 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 TTMPQ5BVD1 217 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 IL23RQ5VWK5 629 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 SLC22A10Q63ZE4 541 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 POGLUT1Q8NBL1 392 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 C17orf47Q8NEP4 570 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 OR52N2Q8NGI0 321 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 PAQR8Q8TEZ7 354 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 LCORQ96JN0 433 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-204ENST00000446876 FAM173AQ9BQD7 235 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 TTTY12Q9BZ98 90 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 FOLH1BQ9HBA9 442 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 PROK2Q9HC23 129 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 SH3BP4Q9P0V3 963 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 PRODH2Q9UF12 536 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 CNOT11Q9UKZ1 510 aaKnown RBP13.65□□□□□ -0.22
HDAC4-204ENST00000446876 CFL2Q9Y281 166 aa13.65□□□□□ -0.22
HDAC4-204ENST00000446876 ZNF407Q9C0G0 2248 aa13.64□□□□□ -0.23
HDAC4-204ENST00000446876 ASNA1O43681 348 aa13.64□□□□□ -0.23
HDAC4-204ENST00000446876 CDC40O60508 579 aaKnown RBP eCLIP13.64□□□□□ -0.23
HDAC4-204ENST00000446876 PLOD3O60568 738 aa13.64□□□□□ -0.23
HDAC4-204ENST00000446876 MAPK1P28482 360 aa13.64□□□□□ -0.23
HDAC4-204ENST00000446876 SLC18A1P54219 525 aa13.64□□□□□ -0.23
HDAC4-204ENST00000446876 NRG3P56975 720 aa13.64□□□□□ -0.23
HDAC4-204ENST00000446876 PPIAP62937 165 aaKnown RBP13.64□□□□□ -0.23
HDAC4-204ENST00000446876 ZNF155Q12901 538 aaPredicted RBP13.64□□□□□ -0.23
HDAC4-204ENST00000446876 RPS6KA2Q15349 733 aa13.64□□□□□ -0.23
HDAC4-204ENST00000446876 CMPK2Q5EBM0 449 aa13.64□□□□□ -0.23
HDAC4-204ENST00000446876 NPSR1Q6W5P4 371 aa13.64□□□□□ -0.23
HDAC4-204ENST00000446876 GK5Q6ZS86 529 aa13.64□□□□□ -0.23
HDAC4-204ENST00000446876 WDR53Q7Z5U6 358 aaPredicted RBP13.64□□□□□ -0.23
HDAC4-204ENST00000446876 HOMEZQ8IX15 550 aa13.64□□□□□ -0.23
HDAC4-204ENST00000446876 FBXW8Q8N3Y1 598 aa13.64□□□□□ -0.23
HDAC4-204ENST00000446876 KRTCAP2Q8N6L1 136 aa13.64□□□□□ -0.23
HDAC4-204ENST00000446876 OR7A2PQ8NGA2 310 aa13.64□□□□□ -0.23
HDAC4-204ENST00000446876 OMA1Q96E52 524 aa13.64□□□□□ -0.23
HDAC4-204ENST00000446876 VSTM2LQ96N03 204 aa13.64□□□□□ -0.23
HDAC4-204ENST00000446876 NUF2Q9BZD4 464 aa13.64□□□□□ -0.23
HDAC4-204ENST00000446876 DEFB127Q9H1M4 99 aa13.64□□□□□ -0.23
HDAC4-204ENST00000446876 AKTIPQ9H8T0 292 aa13.64□□□□□ -0.23
HDAC4-204ENST00000446876 ARGLU1Q9NWB6 273 aaPredicted RBP13.64□□□□□ -0.23
HDAC4-204ENST00000446876 HAO1Q9UJM8 370 aa13.64□□□□□ -0.23
HDAC4-204ENST00000446876 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.64□□□□□ -0.23
HDAC4-204ENST00000446876 DIDO1Q9BTC0 2240 aaKnown RBP13.63□□□□□ -0.23
HDAC4-204ENST00000446876 TRGV8A0A0C4DH27 118 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 FRG2CA6NGY1 282 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 SCAMP2O15127 329 aaKnown RBP13.63□□□□□ -0.23
HDAC4-204ENST00000446876 LRRTM2O43300 516 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 TBX19O60806 448 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 SNNO75324 88 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-204ENST00000446876 ERN1O75460 977 aaKnown RBP13.63□□□□□ -0.23
HDAC4-204ENST00000446876 BCAS2O75934 225 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-204ENST00000446876 PDE9AO76083 593 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 GLSO94925 669 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-204ENST00000446876 STSP08842 583 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 G6PDP11413 515 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 HPCAL1P37235 193 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 PPICP45877 212 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 ASMTP46597 345 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 CDK9P50750 372 aaKnown RBP13.63□□□□□ -0.23
HDAC4-204ENST00000446876 KCNJ2P63252 427 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 PLCXD2Q0VAA5 305 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 FOXO1Q12778 655 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 HDXQ7Z353 690 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 FGD2Q7Z6J4 655 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 FJX1Q86VR8 437 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 CHERPQ8IWX8 916 aaKnown RBP13.63□□□□□ -0.23
HDAC4-204ENST00000446876 DND1Q8IYX4 353 aaKnown RBP13.63□□□□□ -0.23
HDAC4-204ENST00000446876 SPPL2AQ8TCT8 520 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 DIO2Q92813 273 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 TMBIM1Q969X1 311 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 ERP27Q96DN0 273 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 ELP4Q96EB1 424 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 ZNF764Q96H86 408 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-204ENST00000446876 ATP6V1G3Q96LB4 118 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 DDX18Q9NVP1 670 aaKnown RBP13.63□□□□□ -0.23
HDAC4-204ENST00000446876 MARCOQ9UEW3 520 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-204ENST00000446876 SLC5A6Q9Y289 635 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 GPR55Q9Y2T6 319 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-204ENST00000446876 LIPGQ9Y5X9 500 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.63□□□□□ -0.23
HDAC4-204ENST00000446876 FREM3P0C091 2139 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 MYO7BQ6PIF6 2116 aa13.63□□□□□ -0.23
HDAC4-204ENST00000446876 DNAJC13O75165 2243 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 A0A087WV62 115 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 LRRC3CA6NJW4 275 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 CAPN14A8MX76 684 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms