RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 CXXC4Q9H2H0 198 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 MAD2L2Q9UI95 211 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 HOOK1Q9UJC3 728 aaKnown RBP3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 NIP7Q9Y221 180 aaKnown RBP eCLIP3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 FOXA2Q9Y261 457 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 NID2Q14112 1375 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 SCN7AQ01118 1682 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 COL5A3P25940 1745 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 UQCRHLA0A096LP55 91 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 SH3PXD2BA1X283 911 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 ZNF724A8MTY0 619 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 SRRM5B3KS81 715 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 DYNC1I1O14576 645 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 CCSO14618 274 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 CSDE1O75534 798 aaKnown RBP3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 IGHV3-13P01766 116 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 UQCRHP07919 91 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 LYNP07948 512 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 FHP07954 510 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 ADORA3P0DMS8 318 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 CPA3P15088 417 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 CAPN2P17655 700 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 RPL9P32969 192 aaKnown RBP3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 ZFP36L2P47974 494 aaKnown RBP3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 RPS27AP62979 156 aaKnown RBP3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 SRPXP78539 464 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 ITPK1Q13572 414 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 PDE7AQ13946 482 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 LASP1Q14847 261 aaKnown RBP3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 OR1C1Q15619 314 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 WSCD2Q2TBF2 565 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 CAVIN4Q5BKX8 364 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 ALKBH5Q6P6C2 394 aaKnown RBP3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 CD164L2Q6UWJ8 174 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 LUZP1Q86V48 1076 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 TBC1D10CQ8IV04 446 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 SERPINA12Q8IW75 414 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 CNTN4Q8IWV2 1026 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 UNC45BQ8IWX7 931 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 FBXW8Q8N3Y1 598 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 ZNF713Q8N859 430 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 SIDT2Q8NBJ9 832 aaKnown RBP3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 SPC24Q8NBT2 197 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 ZNRF1Q8ND25 227 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 FAM222BQ8WU58 562 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 KRT35Q92764 455 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 RCHY1Q96PM5 261 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 S1PR3Q99500 378 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 ATF6BQ99941 703 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 AGPAT1Q99943 283 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 OCR1Q9BZK8 76 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 TRIM6Q9C030 488 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 HEXA-AS1Q9H8Q6 139 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 UBE2TQ9NPD8 197 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 THYN1Q9P016 225 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 CLIP2Q9UDT6 1046 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 KCNK6Q9Y257 313 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 MMP24Q9Y5R2 645 aa3.62□□□□□ -1.83
HMGB3P6-201ENST00000444896 MAST2Q6P0Q8 1798 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 ECM29Q5VYK3 1845 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 SLIT2O94813 1529 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 DUOX1Q9NRD9 1551 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 TRGV8A0A0C4DH27 118 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 LOC390937A0A1W2PQ73 354 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 IGLON5A6NGN9 336 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 SHISA9B4DS77 424 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 FBP2O00757 339 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 CSO75390 466 aaKnown RBP3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 PRDM1O75626 825 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 OR6A2O95222 327 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 DEXIO95424 95 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 IGHG1P01857 330 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 EZRP15311 586 aaKnown RBP3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 OAS2P29728 719 aaKnown RBP3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 ID1P41134 155 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 SYKP43405 635 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 GSK3BP49841 420 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 NT5C2P49902 561 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 ACTN3Q08043 901 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 COX10Q12887 443 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 LCP2Q13094 533 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 HFEQ30201 348 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 POM121L1PQ3SYA9 428 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 IFI44LQ53G44 452 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 TCTEX1D4Q5JR98 221 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 FAM182AQ5T1J6 154 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 OLFM4Q6UX06 510 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 TIPARPQ7Z3E1 657 aaKnown RBP3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 SLC47A2Q86VL8 602 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 C17orf64Q86WR6 236 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 SNX32Q86XE0 403 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 PLA2G4DQ86XP0 818 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 RNF130Q86XS8 419 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 STHQ8IWL8 128 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 LYG1Q8N1E2 194 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 LINC00301Q8NCQ3 95 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 ST7LQ8TDW4 575 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 ESR2Q92731 530 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 RASL10AQ92737 203 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 CABS1Q96KC9 395 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms