RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 WIPF3A6NGB9 483 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 ZNF354AO60765 605 aaPredicted RBP16.35■□□□□ 0.21
CCDC188-201ENST00000439765 OR6B1O95007 311 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 CD46P15529 392 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 TRHRP34981 398 aaPredicted RBP16.35■□□□□ 0.21
CCDC188-201ENST00000439765 MRPL19P49406 292 aaKnown RBP16.35■□□□□ 0.21
CCDC188-201ENST00000439765 HLCSP50747 726 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 ATP4BP51164 291 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 EXOSC7Q15024 291 aaKnown RBP16.35■□□□□ 0.21
CCDC188-201ENST00000439765 EBPQ15125 230 aaKnown RBP16.35■□□□□ 0.21
CCDC188-201ENST00000439765 RPS6KA2Q15349 733 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 PRSS53Q2L4Q9 553 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 ANKRD26P1Q6NSI1 321 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 IKBIPQ70UQ0 350 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 CPSF7Q8N684 471 aaKnown RBP16.35■□□□□ 0.21
CCDC188-201ENST00000439765 HORMAD2Q8N7B1 307 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 ST6GALNAC3Q8NDV1 305 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 OR9A2Q8NGT5 310 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 NUBPLQ8TB37 319 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 TAAR6Q96RI8 345 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 NMUR2Q9GZQ4 415 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 WWTR1Q9GZV5 400 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 SLC35C2Q9NQQ7 365 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 ERRFI1Q9UJM3 462 aaPredicted RBP16.35■□□□□ 0.21
CCDC188-201ENST00000439765 EXO1Q9UQ84 846 aaKnown RBP16.35■□□□□ 0.21
CCDC188-201ENST00000439765 ERVK-11Q9UQG0 969 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 ITPR2Q14571 2701 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 TEX15Q9BXT5 2789 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 GTF3C1Q12789 2109 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 A8MVJ9 347 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 AKAP10O43572 662 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 DCTN3O75935 186 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 STX1BP61266 288 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 SRSF11Q05519 484 aaKnown RBP16.35■□□□□ 0.21
CCDC188-201ENST00000439765 FUT7Q11130 342 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 SQLEQ14534 574 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 PTGR1Q14914 329 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 MAPKAPK3Q16644 382 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 PDCD4Q53EL6 469 aaKnown RBP16.35■□□□□ 0.21
CCDC188-201ENST00000439765 RPUSD3Q6P087 351 aaKnown RBP16.35■□□□□ 0.21
CCDC188-201ENST00000439765 IL20RBQ6UXL0 311 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 GALNTL5Q7Z4T8 443 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 CCDC116Q8IYX3 515 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 FAM9CQ8IZT9 166 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 SIMC1Q8NDZ2 872 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 TMEM125Q96AQ2 219 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 SCMH1Q96GD3 660 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 BBS4Q96RK4 519 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 MYLK2Q9H1R3 596 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 OR10A5Q9H207 317 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 ANKRA2Q9H9E1 313 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 SDR39U1Q9NRG7 319 aaPredicted RBP16.35■□□□□ 0.21
CCDC188-201ENST00000439765 MRGBPQ9NV56 204 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 HPF1Q9NWY4 346 aa16.35■□□□□ 0.21
CCDC188-201ENST00000439765 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.35■□□□□ 0.21
CCDC188-201ENST00000439765 WBP11Q9Y2W2 641 aaKnown RBP16.35■□□□□ 0.21
CCDC188-201ENST00000439765 OR6C76A6NM76 312 aa16.34■□□□□ 0.21
CCDC188-201ENST00000439765 ANKRD28O15084 1053 aa16.34■□□□□ 0.21
CCDC188-201ENST00000439765 RASAL1O95294 804 aa16.34■□□□□ 0.21
CCDC188-201ENST00000439765 LDLRP01130 860 aa16.34■□□□□ 0.21
CCDC188-201ENST00000439765 GPX3P22352 226 aa16.34■□□□□ 0.21
CCDC188-201ENST00000439765 ASMTP46597 345 aa16.34■□□□□ 0.21
CCDC188-201ENST00000439765 CLDN8P56748 225 aa16.34■□□□□ 0.21
CCDC188-201ENST00000439765 GABPB1Q06547 395 aaPredicted RBP16.34■□□□□ 0.21
CCDC188-201ENST00000439765 MGAT2Q10469 447 aa16.34■□□□□ 0.21
CCDC188-201ENST00000439765 ELOAQ14241 798 aaKnown RBP16.34■□□□□ 0.21
CCDC188-201ENST00000439765 INAQ16352 499 aa16.34■□□□□ 0.21
CCDC188-201ENST00000439765 NNATQ16517 81 aa16.34■□□□□ 0.21
CCDC188-201ENST00000439765 TRMT12Q53H54 448 aaKnown RBP16.34■□□□□ 0.21
CCDC188-201ENST00000439765 MDGA2Q7Z553 956 aa16.34■□□□□ 0.21
CCDC188-201ENST00000439765 SAMD14Q8IZD0 417 aaPredicted RBP16.34■□□□□ 0.21
CCDC188-201ENST00000439765 MIER2Q8N344 545 aa16.34■□□□□ 0.21
CCDC188-201ENST00000439765 ZNF615Q8N8J6 731 aa16.34■□□□□ 0.21
CCDC188-201ENST00000439765 TMEM178AQ8NBL3 297 aa16.34■□□□□ 0.21
CCDC188-201ENST00000439765 KAT2AQ92830 837 aa16.34■□□□□ 0.21
CCDC188-201ENST00000439765 LRRC37BQ96QE4 947 aa16.34■□□□□ 0.21
CCDC188-201ENST00000439765 TRIM45Q9H8W5 580 aaPredicted RBP16.34■□□□□ 0.21
CCDC188-201ENST00000439765 ZIM2Q9NZV7 527 aa16.34■□□□□ 0.21
CCDC188-201ENST00000439765 BCAP29Q9UHQ4 241 aa16.34■□□□□ 0.21
CCDC188-201ENST00000439765 DTX4Q9Y2E6 619 aa16.34■□□□□ 0.21
CCDC188-201ENST00000439765 C2orf92A0A1B0GVN3 265 aa16.33■□□□□ 0.2
CCDC188-201ENST00000439765 NME2P1O60361 137 aa16.33■□□□□ 0.2
CCDC188-201ENST00000439765 SP1P08047 785 aa16.33■□□□□ 0.2
CCDC188-201ENST00000439765 S1PR1P21453 382 aa16.33■□□□□ 0.2
CCDC188-201ENST00000439765 NME2P22392 152 aa16.33■□□□□ 0.2
CCDC188-201ENST00000439765 NTSP30990 170 aa16.33■□□□□ 0.2
CCDC188-201ENST00000439765 SOX18P35713 384 aa16.33■□□□□ 0.2
CCDC188-201ENST00000439765 NCBP2P52298 156 aaKnown RBP eCLIP16.33■□□□□ 0.2
CCDC188-201ENST00000439765 NME5P56597 212 aa16.33■□□□□ 0.2
CCDC188-201ENST00000439765 UFM1P61960 85 aa16.33■□□□□ 0.2
CCDC188-201ENST00000439765 MAP4K2Q12851 820 aa16.33■□□□□ 0.2
CCDC188-201ENST00000439765 DUSP8Q13202 625 aa16.33■□□□□ 0.2
CCDC188-201ENST00000439765 ZNF628Q5EBL2 1059 aa16.33■□□□□ 0.2
CCDC188-201ENST00000439765 SLC25A25Q6KCM7 469 aa16.33■□□□□ 0.2
CCDC188-201ENST00000439765 BCORP1Q8N888 145 aa16.33■□□□□ 0.2
CCDC188-201ENST00000439765 C16orf52Q8NHV5 167 aa16.33■□□□□ 0.2
CCDC188-201ENST00000439765 SLC22A8Q8TCC7 542 aa16.33■□□□□ 0.2
CCDC188-201ENST00000439765 FAR1Q8WVX9 515 aa16.33■□□□□ 0.2
CCDC188-201ENST00000439765 OLAHQ9NV23 265 aa16.33■□□□□ 0.2
CCDC188-201ENST00000439765 SLC5A6Q9Y289 635 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms