RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 CSAG2Q9Y5P2 127 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 ETV7Q9Y603 341 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 IGSF10Q6WRI0 2623 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 PTPRFP10586 1907 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 ADAMTS9Q9P2N4 1935 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 AGRNO00468 2067 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 COL11A1P12107 1806 aaPredicted RBP2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 ZNF236Q9UL36 1845 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 TEX15Q9BXT5 2789 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 ADGRA3Q8IWK6 1321 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 A0A087X0K7 114 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 A0A1W2PPR1 153 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 MPTX1A8MV57 137 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 G3V2L1 256 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 CTAGE5O15320 804 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 TLX2O43763 284 aaPredicted RBP2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 IDH3BO43837 385 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 GMNNO75496 209 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 GOSR1O95249 250 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 CXCL10P02778 98 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 NUDT17P0C025 328 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 ZNF806P0C7X5 589 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 SKILP12757 684 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 CSRP1P21291 193 aaKnown RBP2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 GPR183P32249 361 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 COPB2P35606 906 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 SERPINH1P50454 418 aaKnown RBP2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 SMSP52788 366 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 ADARP55265 1226 aaKnown RBP2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 EVCP57679 992 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 SLC3A1Q07837 685 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 ARHGAP1Q07960 439 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 CALCOCO2Q13137 446 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 FASTKD3Q14CZ7 662 aaKnown RBP2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 TCTEX1D4Q5JR98 221 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 AGAP6Q5VW22 663 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 PLPP4Q5VZY2 271 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 Q6ZVQ6 151 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 ARMCX2Q7L311 632 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 TMEM126BQ8IUX1 230 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 DND1Q8IYX4 353 aaKnown RBP2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 METTL4Q8N3J2 472 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 CHCHD4Q8N4Q1 142 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 ZNF713Q8N859 430 aaPredicted RBP2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 Q8NBF4 154 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 RNF149Q8NC42 400 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 VN1R2Q8NFZ6 395 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 OR9Q2Q8NGE9 314 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 CHURC1Q8WUH1 139 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 KRT35Q92764 455 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 GGHQ92820 318 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 TOP1MTQ969P6 601 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 SNRNP40Q96DI7 357 aaKnown RBP2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 C12orf42Q96LP6 360 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 AGAP4Q96P64 663 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 OVOL2Q9BRP0 275 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 MTG1Q9BT17 334 aaPredicted RBP2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 PAPOLGQ9BWT3 736 aaKnown RBP2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 KCNK13Q9HB14 408 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 SPG21Q9NZD8 308 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 TRPC4Q9UBN4 977 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 LEF1Q9UJU2 399 aaPredicted RBP2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 FBXW2Q9UKT8 454 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 NUDCQ9Y266 331 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 KNSTRNQ9Y448 316 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 CREBBPQ92793 2442 aa2.72□□□□□ -1.97
HMGB3P12-201ENST00000438745 DOCK2Q92608 1830 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 SPEF2Q9C093 1822 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 SPAARA0A1B0GVQ0 90 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 C5orf51A6NDU8 294 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 A8MU76 341 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 ANHXE9PGG2 379 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 LMO7DNF2Z398 122 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 SOCS3O14543 225 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 CHUKO15111 745 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 ZNF749O43361 778 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 CLN5O75503 358 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 CEACAM4O75871 244 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 FLOT1O75955 427 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 AKAP3O75969 853 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 GAS8O95995 478 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 CHRNGP07510 517 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 LYNP07948 512 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 TRIM49P0CI25 452 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 TRIM49CP0CI26 452 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 B4GALT1P15291 398 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 CD1DP15813 335 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 SELEP16581 610 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 VCLP18206 1134 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 DNAJB1P25685 340 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 OXTRP30559 389 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 BTDP43251 543 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 TMEM50BP56557 158 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 SLC8A3P57103 927 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 ZNF177Q13360 481 aaPredicted RBP2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 C3AR1Q16581 482 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 ZNF239Q16600 458 aaKnown RBP2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 CCDC57Q2TAC2 916 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 C2CD6Q53TS8 623 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms