RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 NUP43Q8NFH3 380 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 NUBPLQ8TB37 319 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 CTHRC1Q96CG8 243 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 OR52E6Q96RD3 313 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 YIPF4Q9BSR8 244 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 RABEP2Q9H5N1 569 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 CCDC134Q9H6E4 229 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 TRIM33Q9UPN9 1127 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 DTX4Q9Y2E6 619 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 OR10H1Q9Y4A9 318 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 DOCK10Q96BY6 2186 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 TRAV17A0A0B4J275 112 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 ANKRD28O15084 1053 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 GPX3P22352 226 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 IL12AP29459 219 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 CCT3P49368 545 aaKnown RBP13.47□□□□□ -0.25
SGCE-204ENST00000428696 EMDP50402 254 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 SEC24CP53992 1094 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 GNGT1P63211 74 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 PRR5P85299 388 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 ZNHIT3Q15649 155 aaPredicted RBP13.47□□□□□ -0.25
SGCE-204ENST00000428696 AGKQ53H12 422 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 ZNF766Q5HY98 468 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 CPLX4Q7Z7G2 160 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 SLC44A2Q8IWA5 706 aaPredicted RBP13.47□□□□□ -0.25
SGCE-204ENST00000428696 CLEC4FQ8N1N0 589 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 CISD2Q8N5K1 135 aaKnown RBP13.47□□□□□ -0.25
SGCE-204ENST00000428696 OR9I1Q8NGQ6 314 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 OR5AK3PQ8NH89 298 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 FBXO30Q8TB52 745 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 JADE3Q92613 823 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 ZNF764Q96H86 408 aaPredicted RBP13.47□□□□□ -0.25
SGCE-204ENST00000428696 SIKE1Q9BRV8 207 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 HES7Q9BYE0 225 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 NXF5Q9H1B4 397 aaKnown RBP13.47□□□□□ -0.25
SGCE-204ENST00000428696 CLMPQ9H6B4 373 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 FOLH1BQ9HBA9 442 aa13.47□□□□□ -0.25
SGCE-204ENST00000428696 ZCCHC3Q9NUD5 404 aaKnown RBP13.47□□□□□ -0.25
SGCE-204ENST00000428696 C19orf53Q9UNZ5 99 aaPredicted RBP13.47□□□□□ -0.25
SGCE-204ENST00000428696 A0A087WV62 115 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 PRSS51A0A1B0GVH4 220 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 PLOD2O00469 737 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 EMC8O43402 210 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 ZNF354AO60765 605 aaPredicted RBP13.46□□□□□ -0.26
SGCE-204ENST00000428696 ERN1O75460 977 aaKnown RBP13.46□□□□□ -0.26
SGCE-204ENST00000428696 SLITRK5O94991 958 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 PGRP06401 933 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 SOX18P35713 384 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 KRT20P35900 424 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 RFX3P48380 749 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 POLR2JP52435 117 aaKnown RBP13.46□□□□□ -0.26
SGCE-204ENST00000428696 CORO7P57737 925 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 C21orf58P58505 322 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 TP53BP2Q13625 1128 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 FHL5Q5TD97 284 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 Q6ZS92 163 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 MDGA2Q7Z553 956 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 ZNF843Q8N446 348 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 GLB1L3Q8NCI6 653 aaPredicted RBP13.46□□□□□ -0.26
SGCE-204ENST00000428696 SLC9A6Q92581 669 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 PNPLA2Q96AD5 504 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 TESCQ96BS2 214 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 ERP27Q96DN0 273 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 OTUB1Q96FW1 271 aaPredicted RBP13.46□□□□□ -0.26
SGCE-204ENST00000428696 LCORQ96JN0 433 aaPredicted RBP13.46□□□□□ -0.26
SGCE-204ENST00000428696 ELAC2Q9BQ52 826 aaKnown RBP13.46□□□□□ -0.26
SGCE-204ENST00000428696 CXorf36Q9H7Y0 433 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 SDR39U1Q9NRG7 319 aaPredicted RBP13.46□□□□□ -0.26
SGCE-204ENST00000428696 ZIM2Q9NZV7 527 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 CCDC167Q9P0B6 97 aa13.46□□□□□ -0.26
SGCE-204ENST00000428696 COPG1Q9Y678 874 aaKnown RBP13.46□□□□□ -0.26
SGCE-204ENST00000428696 CNTRLQ7Z7A1 2325 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 GMNCA6NCL1 334 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 G3V3Y1 287 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 NR5A2O00482 541 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 REM1O75628 298 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 SLC25A12O75746 678 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 IL6P05231 212 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 SP1P08047 785 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 DRD5P21918 477 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 LSP1P33241 339 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 GABRA3P34903 492 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 FRKP42685 505 aaPredicted RBP13.45□□□□□ -0.26
SGCE-204ENST00000428696 PPICP45877 212 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 MLLT10P55197 1068 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 KCNK10P57789 538 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 DCAF7P61962 342 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 HBA1P69905 142 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 PHC1P78364 1004 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 C19orf57Q0VDD7 668 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 DPY19L1Q2PZI1 675 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 TIGD2Q4W5G0 525 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 SLC25A25Q6KCM7 469 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 ANGPTL8Q6UXH0 198 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 ZNF621Q6ZSS3 439 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 OR2L13Q8N349 312 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 OR8J2Q8NGG1 315 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 GPR151Q8TDV0 419 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 ADIPOR1Q96A54 375 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 TP53INP1Q96A56 240 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms