RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 GALNT16Q8N428 558 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 KIF2BQ8N4N8 673 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 ADCY4Q8NFM4 1077 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 OR7G2Q8NG99 324 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 GOT1L1Q8NHS2 421 aaPredicted RBP6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 SLC2A12Q8TD20 617 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 APOBEC4Q8WW27 367 aaKnown RBP6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 OR5P2Q8WZ92 322 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 TTC9Q92623 222 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 HOXB13Q92826 284 aaPredicted RBP6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 KAT2AQ92830 837 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 NCLNQ969V3 563 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 ERP27Q96DN0 273 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 ELP4Q96EB1 424 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 ZBED6CLQ96FA7 236 aaPredicted RBP6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 CCDC115Q96NT0 180 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 PRPF18Q99633 342 aaKnown RBP6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 NPAS2Q99743 824 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 NMUR2Q9GZQ4 415 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 FAM107BQ9H098 131 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 NSRP1Q9H0G5 558 aaKnown RBP6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 MYLK2Q9H1R3 596 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 RASSF4Q9H2L5 321 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 RABEP2Q9H5N1 569 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 ZNF552Q9H707 407 aaPredicted RBP6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 CXorf36Q9H7Y0 433 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 SERHLQ9NQF3 203 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 GIMAP4Q9NUV9 329 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 ATAD3AQ9NVI7 634 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 BTNL2Q9UIR0 455 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 C19orf53Q9UNZ5 99 aaPredicted RBP6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 ERVK-19Q9WJR5 959 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 ENTPD4Q9Y227 616 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 CLCA3PQ9Y6N3 262 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 MED13Q9UHV7 2174 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 ATMQ13315 3056 aa6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 MAP1BP46821 2468 aaKnown RBP6.56□□□□□ -1.36
CHCHD3P1-201ENST00000425516 PKD1L2Q7Z442 2459 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 OR6C76A6NM76 312 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 UPK1AO00322 258 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 SLITRK5O94991 958 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 C6orf47O95873 294 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 IL6P05231 212 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 HOXB9P17482 250 aaPredicted RBP6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 DDX5P17844 614 aaKnown RBP6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 TNNI3P19429 210 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 CAPN3P20807 821 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 EFNA1P20827 205 aaPredicted RBP6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 NT5EP21589 574 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 PTPN6P29350 595 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 ADSLP30566 484 aaPredicted RBP6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 NTSP30990 170 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 S100A3P33764 101 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 MAP3K8P41279 467 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 EMDP50402 254 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 CDK9P50750 372 aaKnown RBP6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 CLCN2P51788 898 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 PGDP52209 483 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 POLR2JP52435 117 aaKnown RBP6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 STX1BP61266 288 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 HBA1P69905 142 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 RNF4P78317 190 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 MRPS35P82673 323 aaKnown RBP6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 KLF10Q13118 480 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 MYBPC3Q14896 1274 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 EXOSC7Q15024 291 aaKnown RBP6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 COL28A1Q2UY09 1125 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 AGKQ53H12 422 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 EXOSC6Q5RKV6 272 aaKnown RBP6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 ANXA8L1Q5VT79 327 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 JMJD6Q6NYC1 403 aaPredicted RBP6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 BORAQ6PGQ7 559 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 C19orf48Q6RUI8 117 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 IGFL2Q6UWQ7 119 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 MSANTD1Q6ZTZ1 278 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 GPR155Q7Z3F1 870 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 WFDC8Q8IUA0 241 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 C9orf40Q8IXQ3 194 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 CLECL1Q8IZS7 167 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 OR2L13Q8N349 312 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 ANKS4BQ8N8V4 417 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 ZNF441Q8N8Z8 693 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 CLEC1AQ8NC01 280 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 OR7G1Q8NGA0 311 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 OR9A2Q8NGT5 310 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 OR8K3Q8NH51 312 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 C16orf52Q8NHV5 167 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 TSPEARQ8WU66 669 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 GTF2H4Q92759 462 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 EXTL1Q92935 676 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 ADIPOR1Q96A54 375 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 VPS33AQ96AX1 596 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 VMP1Q96GC9 406 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 THOC3Q96J01 351 aaKnown RBP6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 ART5Q96L15 291 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 ZBTB18Q99592 522 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 CCDC106Q9BWC9 280 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 OR8D2Q9GZM6 311 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 LHPPQ9H008 270 aa6.55□□□□□ -1.36
CHCHD3P1-201ENST00000425516 OR10A5Q9H207 317 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms