RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 IGHG3P01860 377 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 ABCB1P08183 1280 aaPredicted RBP16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 SDC1P18827 310 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 DRD5P21918 477 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 NRG3P56975 720 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 DCAF7P61962 342 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 PLGLB1Q02325 96 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 PRAMEF20Q5VT98 475 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 DOLPP1Q86YN1 238 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 FAM9CQ8IZT9 166 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 OR7G2Q8NG99 324 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 SPPL2AQ8TCT8 520 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 ZNF764Q96H86 408 aaPredicted RBP16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 CCDC120Q96HB5 630 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 C3orf30Q96M34 536 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 BBS4Q96RK4 519 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 SECISBP2Q96T21 854 aaKnown RBP16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 CCT7Q99832 543 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 CENPHQ9H3R5 247 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 GLIPR2Q9H4G4 154 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 MIEF1Q9NQG6 463 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 TMED5Q9Y3A6 229 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 HRH3Q9Y5N1 445 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 ZNF407Q9C0G0 2248 aa16.45■□□□□ 0.22
IGHV3-47-201ENST00000425060 A1L4Q6 167 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 LRRC3CA6NJW4 275 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 ACOT7O00154 380 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 PLOD2O00469 737 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 TP53I11O14683 189 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 ACOX3O15254 700 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 ITM2AO43736 263 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 TBX19O60806 448 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 TRIM3O75382 744 aaPredicted RBP16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 NME6O75414 186 aaPredicted RBP16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 PPM1BO75688 479 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 CT45A8P0DMV1 189 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 CT45A9P0DMV2 189 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 ABOP16442 354 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 MAGEA5P43359 124 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 TMED10P49755 219 aaKnown RBP16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 RPL38P63173 70 aaKnown RBP16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 CT45A2Q5DJT8 189 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 DDIASQ8IXT1 998 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 PRR22Q8IZ63 422 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 FAM109AQ8N4B1 249 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 OR5M3Q8NGP4 307 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 FAM57AQ8TBR7 257 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 AGR3Q8TD06 166 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 HGDQ93099 445 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 VSTM2LQ96N03 204 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 BTBD9Q96Q07 612 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 PHF12Q96QT6 1004 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 ANGPTL4Q9BY76 406 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 ZNF395Q9H8N7 513 aaPredicted RBP16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 ZFP64Q9NPA5 681 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 SH3BGRL2Q9UJC5 107 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 NINQ8N4C6 2090 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 EXPH5Q8NEV8 1989 aa16.44■□□□□ 0.22
IGHV3-47-201ENST00000425060 A0A087WV62 115 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 A0A1B0GVC2 190 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 WDR91A4D1P6 747 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 FRG2CA6NGY1 282 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 ADAM10O14672 748 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 CDC40O60508 579 aaKnown RBP eCLIP16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 LYPLA1O75608 230 aaPredicted RBP16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 PDE9AO76083 593 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 SLITRK5O94991 958 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 LRATO95237 230 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 JUNP05412 331 aaKnown RBP16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 RFPL3SP0C7P2 107 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 PTGS2P35354 604 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 CASP3P42574 277 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 NCBP2P52298 156 aaKnown RBP eCLIP16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 CASP6P55212 293 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 PDE7AQ13946 482 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 CHI3L2Q15782 390 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 NNATQ16517 81 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 ZNF385BQ569K4 471 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 TBCELQ5QJ74 424 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 BICRALQ6AI39 1079 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 HIST2H2BCQ6DN03 193 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 DESI1Q6ICB0 168 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 ARHGAP11AQ6P4F7 1023 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 TMEM81Q6P7N7 255 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 MAMDC2Q7Z304 686 aaPredicted RBP16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 ITLN2Q8WWU7 325 aaPredicted RBP16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 DIO2Q92813 273 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 GFM2Q969S9 779 aaKnown RBP16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 AMDHD1Q96NU7 426 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 TSSK3Q96PN8 268 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 C20orf27Q9GZN8 174 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 STMN4Q9H169 189 aaPredicted RBP16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 GIMAP2Q9UG22 337 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 BAIAP2L1Q9UHR4 511 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 C19orf53Q9UNZ5 99 aaPredicted RBP16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 MEMO1Q9Y316 297 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 LIPGQ9Y5X9 500 aa16.43■□□□□ 0.22
IGHV3-47-201ENST00000425060 ERLIN1O75477 346 aa16.42■□□□□ 0.22
IGHV3-47-201ENST00000425060 ZWINTO95229 277 aa16.42■□□□□ 0.22
IGHV3-47-201ENST00000425060 PSMG1O95456 288 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms