RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 RFTN2Q52LD8 501 aaPredicted RBP13.62□□□□□ -0.23
LIMS4-201ENST00000413601 TNFAIP8L3Q5GJ75 292 aa13.62□□□□□ -0.23
LIMS4-201ENST00000413601 CES4AQ5XG92 561 aa13.62□□□□□ -0.23
LIMS4-201ENST00000413601 BICRALQ6AI39 1079 aa13.62□□□□□ -0.23
LIMS4-201ENST00000413601 C3P1Q6ZMU1 363 aa13.62□□□□□ -0.23
LIMS4-201ENST00000413601 MAMDC2Q7Z304 686 aaPredicted RBP13.62□□□□□ -0.23
LIMS4-201ENST00000413601 DOLPP1Q86YN1 238 aa13.62□□□□□ -0.23
LIMS4-201ENST00000413601 FAM9CQ8IZT9 166 aa13.62□□□□□ -0.23
LIMS4-201ENST00000413601 TMEM251Q8N6I4 163 aa13.62□□□□□ -0.23
LIMS4-201ENST00000413601 OR6Y1Q8NGX8 325 aa13.62□□□□□ -0.23
LIMS4-201ENST00000413601 DIO2Q92813 273 aa13.62□□□□□ -0.23
LIMS4-201ENST00000413601 GFM2Q969S9 779 aaKnown RBP13.62□□□□□ -0.23
LIMS4-201ENST00000413601 LCORQ96JN0 433 aaPredicted RBP13.62□□□□□ -0.23
LIMS4-201ENST00000413601 ZDHHC11Q9H8X9 412 aa13.62□□□□□ -0.23
LIMS4-201ENST00000413601 SSU72Q9NP77 194 aaKnown RBP13.62□□□□□ -0.23
LIMS4-201ENST00000413601 PLSCR2Q9NRY7 297 aa13.62□□□□□ -0.23
LIMS4-201ENST00000413601 TAS2R7Q9NYW3 318 aa13.62□□□□□ -0.23
LIMS4-201ENST00000413601 SUCOQ9UBS9 1254 aaKnown RBP13.62□□□□□ -0.23
LIMS4-201ENST00000413601 PRODH2Q9UF12 536 aa13.62□□□□□ -0.23
LIMS4-201ENST00000413601 ZDHHC2Q9UIJ5 367 aa13.62□□□□□ -0.23
LIMS4-201ENST00000413601 WBP11Q9Y2W2 641 aaKnown RBP13.62□□□□□ -0.23
LIMS4-201ENST00000413601 PHF3Q92576 2039 aaKnown RBP13.62□□□□□ -0.23
LIMS4-201ENST00000413601 SPTAN1Q13813 2472 aaKnown RBP13.62□□□□□ -0.23
LIMS4-201ENST00000413601 PCNX1Q96RV3 2341 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 ATP6AP2A0A1C7CYW4 349 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 LSM1O15116 133 aaKnown RBP13.61□□□□□ -0.23
LIMS4-201ENST00000413601 ATP6AP2O75787 350 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 BCAS2O75934 225 aaPredicted RBP13.61□□□□□ -0.23
LIMS4-201ENST00000413601 ABCB1P08183 1280 aaPredicted RBP13.61□□□□□ -0.23
LIMS4-201ENST00000413601 CELA3AP09093 270 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 COL8A1P27658 744 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 SERPINB5P36952 375 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 PPICP45877 212 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 TMED10P49755 219 aaKnown RBP13.61□□□□□ -0.23
LIMS4-201ENST00000413601 NCBP2P52298 156 aaKnown RBP eCLIP13.61□□□□□ -0.23
LIMS4-201ENST00000413601 RPL38P63173 70 aaKnown RBP13.61□□□□□ -0.23
LIMS4-201ENST00000413601 HYAL4Q2M3T9 481 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 PAOXQ6QHF9 649 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 IKBIPQ70UQ0 350 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 FAM109AQ8N4B1 249 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 OR7G2Q8NG99 324 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 PPP1R14CQ8TAE6 165 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 SPPL2AQ8TCT8 520 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 ERP27Q96DN0 273 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 HSPBAP1Q96EW2 488 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 FCRL1Q96LA6 429 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 JSRP1Q96MG2 331 aaPredicted RBP13.61□□□□□ -0.23
LIMS4-201ENST00000413601 TSSK3Q96PN8 268 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 PHF12Q96QT6 1004 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 DOHHQ9BU89 302 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 KCNK9Q9NPC2 374 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 GIMAP2Q9UG22 337 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 BAIAP2L1Q9UHR4 511 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 LIPGQ9Y5X9 500 aa13.61□□□□□ -0.23
LIMS4-201ENST00000413601 ARHGAP21Q5T5U3 1957 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 PRRG2O14669 202 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 TM9SF1O15321 606 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 AKAP10O43572 662 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 PLOD3O60568 738 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 LYPLA1O75608 230 aaPredicted RBP13.6□□□□□ -0.23
LIMS4-201ENST00000413601 PPM1BO75688 479 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 TPOP07202 933 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 RFPL3SP0C7P2 107 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 SDC1P18827 310 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 DRD5P21918 477 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 ADORA2A-AS1P86434 159 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 MPP2Q14168 576 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 SLC10A1Q14973 349 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 CHI3L2Q15782 390 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 DOPEY1Q5JWR5 2465 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 DESI1Q6ICB0 168 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 ANKRD26P1Q6NSI1 321 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 MTFR2Q6P444 385 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 ARHGAP11AQ6P4F7 1023 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 LRIG3Q6UXM1 1119 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 NCCRP1Q6ZVX7 275 aaPredicted RBP13.6□□□□□ -0.23
LIMS4-201ENST00000413601 CROCCP2Q86T23 111 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 CD163Q86VB7 1156 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 HOMEZQ8IX15 550 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 CLHC1Q8NHS4 586 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 FAM57AQ8TBR7 257 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 ITLN2Q8WWU7 325 aaPredicted RBP13.6□□□□□ -0.23
LIMS4-201ENST00000413601 OMA1Q96E52 524 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 PGM2Q96G03 612 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 C3orf30Q96M34 536 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 CCT7Q99832 543 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 GLIPR2Q9H4G4 154 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 ZNF395Q9H8N7 513 aaPredicted RBP13.6□□□□□ -0.23
LIMS4-201ENST00000413601 ZFP64Q9NPA5 681 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 BOKQ9UMX3 212 aaPredicted RBP13.6□□□□□ -0.23
LIMS4-201ENST00000413601 GPR55Q9Y2T6 319 aaPredicted RBP13.6□□□□□ -0.23
LIMS4-201ENST00000413601 MEMO1Q9Y316 297 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 HRH3Q9Y5N1 445 aa13.6□□□□□ -0.23
LIMS4-201ENST00000413601 ANKRD33BA6NCL7 494 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 FRG2CA6NGY1 282 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 LRRC3CA6NJW4 275 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 ACOX3O15254 700 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 BIRC5O15392 142 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 ITM2AO43736 263 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 PEX11AO75192 247 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms