RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 GHRLQ9UBU3 117 aa12.33□□□□□ -0.44
COL6A3-206ENST00000409809 C1RP00736 705 aa12.33□□□□□ -0.44
COL6A3-206ENST00000409809 CD53P19397 219 aa12.33□□□□□ -0.44
COL6A3-206ENST00000409809 LRRC56Q8IYG6 542 aaPredicted RBP12.33□□□□□ -0.44
COL6A3-206ENST00000409809 OR6C4Q8NGE1 309 aa12.33□□□□□ -0.44
COL6A3-206ENST00000409809 PAQR8Q8TEZ7 354 aa12.33□□□□□ -0.44
COL6A3-206ENST00000409809 THEM6Q8WUY1 208 aa12.33□□□□□ -0.44
COL6A3-206ENST00000409809 OVCA2Q8WZ82 227 aa12.33□□□□□ -0.44
COL6A3-206ENST00000409809 OR2AG1Q9H205 316 aa12.33□□□□□ -0.44
COL6A3-206ENST00000409809 HIPK2Q9H2X6 1198 aa12.33□□□□□ -0.44
COL6A3-206ENST00000409809 RPS19P39019 145 aaKnown RBP12.33□□□□□ -0.44
COL6A3-206ENST00000409809 SLC18B1Q6NT16 456 aa12.33□□□□□ -0.44
COL6A3-206ENST00000409809 NLRP8Q86W28 1048 aa12.33□□□□□ -0.44
COL6A3-206ENST00000409809 HORMAD2Q8N7B1 307 aa12.33□□□□□ -0.44
COL6A3-206ENST00000409809 DBF4BQ8NFT6 615 aa12.33□□□□□ -0.44
COL6A3-206ENST00000409809 SLC25A21Q9BQT8 299 aaPredicted RBP12.33□□□□□ -0.44
COL6A3-206ENST00000409809 RANGRFQ9HD47 186 aaPredicted RBP12.33□□□□□ -0.44
COL6A3-206ENST00000409809 RPP14O95059 124 aaKnown RBP12.33□□□□□ -0.44
COL6A3-206ENST00000409809 ADH1AP07327 375 aa12.33□□□□□ -0.44
COL6A3-206ENST00000409809 CD1EP15812 388 aa12.33□□□□□ -0.44
COL6A3-206ENST00000409809 STC1P52823 247 aa12.33□□□□□ -0.44
COL6A3-206ENST00000409809 ARHGAP19Q14CB8 494 aa12.33□□□□□ -0.44
COL6A3-206ENST00000409809 IL17AQ16552 155 aa12.33□□□□□ -0.44
COL6A3-206ENST00000409809 TMEM150AQ86TG1 271 aa12.33□□□□□ -0.44
COL6A3-206ENST00000409809 OR5B17Q8NGF7 314 aa12.33□□□□□ -0.44
COL6A3-206ENST00000409809 SLC22A23A1A5C7 686 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 LRP5LA4QPB2 252 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 POU4F3Q15319 338 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 ARMC5Q96C12 935 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 DEFB129Q9H1M3 183 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 BEX1Q9HBH7 125 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 ZNF701Q9NV72 531 aaPredicted RBP12.32□□□□□ -0.44
COL6A3-206ENST00000409809 AKR1C4P17516 323 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 PPT1P50897 306 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 RIDAP52758 137 aaKnown RBP12.32□□□□□ -0.44
COL6A3-206ENST00000409809 MAXP61244 160 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 CLRN3Q8NCR9 226 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 OR13C3Q8NGS6 347 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 BMFQ96LC9 184 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 ZDHHC3Q9NYG2 299 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 A0A1W2PQ09 198 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 PIP5K1CO60331 668 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 RNF151Q2KHN1 245 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 ZNF678Q5SXM1 525 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 MLIPQ5VWP3 458 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 SIDT2Q8NBJ9 832 aaKnown RBP12.32□□□□□ -0.44
COL6A3-206ENST00000409809 ZNF75AQ96N20 296 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 GORASP2Q9H8Y8 452 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 PATZ1Q9HBE1 687 aaKnown RBP12.32□□□□□ -0.44
COL6A3-206ENST00000409809 ADARB2Q9NS39 739 aaKnown RBP12.32□□□□□ -0.44
COL6A3-206ENST00000409809 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.32□□□□□ -0.44
COL6A3-206ENST00000409809 IMP3Q9NV31 184 aaKnown RBP12.32□□□□□ -0.44
COL6A3-206ENST00000409809 UTS2RQ9UKP6 389 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 ATF5Q9Y2D1 282 aaPredicted RBP12.32□□□□□ -0.44
COL6A3-206ENST00000409809 CCL15-CCL14A0A0B4J2E2 113 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 TMEM150CB9EJG8 249 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 HLA-AP01891 365 aaKnown RBP12.32□□□□□ -0.44
COL6A3-206ENST00000409809 SPATA31C1P0DKV0 1188 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 SPP1P10451 314 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 SERINC3Q13530 473 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 CCL15Q16663 113 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 PDSS1Q5T2R2 415 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 SLC6A19Q695T7 634 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 ABLIM2Q6H8Q1 611 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 IFNLR1Q8IU57 520 aaPredicted RBP12.32□□□□□ -0.44
COL6A3-206ENST00000409809 FBXO16Q8IX29 292 aaPredicted RBP12.32□□□□□ -0.44
COL6A3-206ENST00000409809 ATG10Q9H0Y0 220 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 TMEM98Q9Y2Y6 226 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 C4BPAP04003 597 aaKnown RBP12.32□□□□□ -0.44
COL6A3-206ENST00000409809 CRHBPP24387 322 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 PSPHP78330 225 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 CLPPQ16740 277 aaPredicted RBP12.32□□□□□ -0.44
COL6A3-206ENST00000409809 ZNF705AQ6ZN79 300 aaPredicted RBP12.32□□□□□ -0.44
COL6A3-206ENST00000409809 SERPINA11Q86U17 422 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 TMEM151AQ8N4L1 468 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 ZFP90Q8TF47 636 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 RNF150Q9ULK6 438 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 UBIAD1Q9Y5Z9 338 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 AKAP12Q02952 1782 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 A0A0G2JLW4 131 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 UBL3O95164 117 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 SNRNP70P08621 437 aaKnown RBP12.32□□□□□ -0.44
COL6A3-206ENST00000409809 CHRM5P08912 532 aaPredicted RBP12.32□□□□□ -0.44
COL6A3-206ENST00000409809 OSMP13725 252 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 ACTR1BP42025 376 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 ZNF84P51523 738 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 VEZF1Q14119 521 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 ZNF561Q8N587 486 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 CD244Q9BZW8 370 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 HSD3B7Q9H2F3 369 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 ZNF638Q14966 1978 aaKnown RBP12.32□□□□□ -0.44
COL6A3-206ENST00000409809 RICTORQ6R327 1708 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 LRRC72A6NJI9 287 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 FHP07954 510 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 ZNF691Q5VV52 312 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 TRAM1L1Q8N609 369 aa12.32□□□□□ -0.44
COL6A3-206ENST00000409809 MED6O75586 246 aa12.31□□□□□ -0.44
COL6A3-206ENST00000409809 THBS2P35442 1172 aa12.31□□□□□ -0.44
COL6A3-206ENST00000409809 KCNC1P48547 511 aa12.31□□□□□ -0.44
COL6A3-206ENST00000409809 PRPS1P60891 318 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms