RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 RNF6Q9Y252 685 aa19.42■□□□□ 0.7
USP39-203ENST00000409470 FAM227AF5H4B4 570 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 SGK494L7N484 410 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 UGT2B17O75795 530 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 ELAVL4P26378 380 aaKnown RBP19.41■□□□□ 0.7
USP39-203ENST00000409470 IDH2P48735 452 aaKnown RBP19.41■□□□□ 0.7
USP39-203ENST00000409470 ROR2Q01974 943 aaKnown RBP19.41■□□□□ 0.7
USP39-203ENST00000409470 CHRNEQ04844 493 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 FAM214AQ32MH5 1076 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 P3H2Q8IVL5 708 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 CA13Q8N1Q1 262 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 OR2L13Q8N349 312 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 SPEM1Q8N4L4 309 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 ZNF540Q8NDQ6 660 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 ZNF420Q8TAQ5 688 aaPredicted RBP19.41■□□□□ 0.7
USP39-203ENST00000409470 SLC9A6Q92581 669 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 C12orf43Q96C57 262 aaKnown RBP19.41■□□□□ 0.7
USP39-203ENST00000409470 SLC35A4Q96G79 324 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 CDX2Q99626 313 aaPredicted RBP19.41■□□□□ 0.7
USP39-203ENST00000409470 LHPPQ9H008 270 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 SLC38A1Q9H2H9 487 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 ANKHQ9HCJ1 492 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 DNAAF2Q9NVR5 837 aaKnown RBP19.41■□□□□ 0.7
USP39-203ENST00000409470 PTGFRNQ9P2B2 879 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 ERVK-18Q9QC07 812 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 SCN2AQ99250 2005 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 FAAHO00519 579 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 CASC3O15234 703 aaKnown RBP19.41■□□□□ 0.7
USP39-203ENST00000409470 NOL3O60936 208 aaKnown RBP19.41■□□□□ 0.7
USP39-203ENST00000409470 LGI1O95970 557 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 ALPPP05187 535 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 PROS1P07225 676 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 FOSL2P15408 326 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 DCKP27707 260 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 KRT20P35900 424 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 PIN1Q13526 163 aaPredicted RBP19.41■□□□□ 0.7
USP39-203ENST00000409470 NPTX1Q15818 432 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 ZNF311Q5JNZ3 666 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 CDC73Q6P1J9 531 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 ERI1Q8IV48 349 aaKnown RBP19.41■□□□□ 0.7
USP39-203ENST00000409470 MCATQ8IVS2 390 aaKnown RBP19.41■□□□□ 0.7
USP39-203ENST00000409470 SHISA5Q8N114 240 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 PARP8Q8N3A8 854 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 SLC16A11Q8NCK7 471 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 TMEM52Q8NDY8 209 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 SPACA7Q96KW9 195 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 DHRS1Q96LJ7 313 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 SLC13A4Q9UKG4 626 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 ACAD8Q9UKU7 415 aa19.41■□□□□ 0.7
USP39-203ENST00000409470 CYR61O00622 381 aa19.4■□□□□ 0.7
USP39-203ENST00000409470 FGF17O60258 216 aa19.4■□□□□ 0.7
USP39-203ENST00000409470 OR10H3O60404 316 aa19.4■□□□□ 0.7
USP39-203ENST00000409470 WBP4O75554 376 aaKnown RBP19.4■□□□□ 0.7
USP39-203ENST00000409470 SEC14L2O76054 403 aa19.4■□□□□ 0.7
USP39-203ENST00000409470 AGR2O95994 175 aa19.4■□□□□ 0.7
USP39-203ENST00000409470 SLC35A2P78381 396 aa19.4■□□□□ 0.7
USP39-203ENST00000409470 TUBA3CQ13748 450 aa19.4■□□□□ 0.7
USP39-203ENST00000409470 SEC23BQ15437 767 aa19.4■□□□□ 0.7
USP39-203ENST00000409470 ZNF770Q6IQ21 691 aaPredicted RBP19.4■□□□□ 0.7
USP39-203ENST00000409470 KLHL17Q6TDP4 642 aa19.4■□□□□ 0.7
USP39-203ENST00000409470 APH1BQ8WW43 257 aa19.4■□□□□ 0.7
USP39-203ENST00000409470 CNDP2Q96KP4 475 aaKnown RBP19.4■□□□□ 0.7
USP39-203ENST00000409470 FNDC11Q9BVV2 318 aa19.4■□□□□ 0.7
USP39-203ENST00000409470 DGCR6LQ9BY27 220 aa19.4■□□□□ 0.7
USP39-203ENST00000409470 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.4■□□□□ 0.7
USP39-203ENST00000409470 CHRDQ9H2X0 955 aa19.4■□□□□ 0.7
USP39-203ENST00000409470 DUSP21Q9H596 190 aa19.4■□□□□ 0.7
USP39-203ENST00000409470 A4GNTQ9UNA3 340 aa19.4■□□□□ 0.7
USP39-203ENST00000409470 AQP9O43315 295 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 RDH16O75452 317 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 OXSR1O95747 527 aaPredicted RBP19.39■□□□□ 0.69
USP39-203ENST00000409470 GPR75O95800 540 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 EPPINO95925 133 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 CTSBP07858 339 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 NT5EP21589 574 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 CAPZBP47756 277 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 DEFB133Q30KQ1 61 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 ZNF628Q5EBL2 1059 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 FAM92BQ6ZTR7 304 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 DEPDC4Q8N2C3 294 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 CAMKK1Q8N5S9 505 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 SIMC1Q8NDZ2 872 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 OR6T1Q8NGN1 323 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 OR9A4Q8NGU2 314 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 DOK4Q8TEW6 326 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 TANKQ92844 425 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 CDS1Q92903 461 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 MAP3K3Q99759 626 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 TBC1D17Q9HA65 648 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 ADAP00813 363 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 PDX1P52945 283 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 HNRNPKP61978 463 aaKnown RBP eCLIP19.39■□□□□ 0.69
USP39-203ENST00000409470 TRMT12Q53H54 448 aaKnown RBP19.39■□□□□ 0.69
USP39-203ENST00000409470 TRIM45Q9H8W5 580 aaPredicted RBP19.39■□□□□ 0.69
USP39-203ENST00000409470 UCK1Q9HA47 277 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 CCNB1IP1Q9NPC3 277 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 IMPAD1Q9NX62 359 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 MGAT4BQ9UQ53 548 aa19.39■□□□□ 0.69
USP39-203ENST00000409470 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.38■□□□□ 0.69
USP39-203ENST00000409470 TPST2O60704 377 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms