RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 SPPL2AQ8TCT8 520 aa13.13□□□□□ -0.31
GPNMB-203ENST00000409458 ADAMTS15Q8TE58 950 aa13.13□□□□□ -0.31
GPNMB-203ENST00000409458 RHBDD1Q8TEB9 315 aa13.13□□□□□ -0.31
GPNMB-203ENST00000409458 LZICQ8WZA0 190 aa13.13□□□□□ -0.31
GPNMB-203ENST00000409458 SLC9A6Q92581 669 aa13.13□□□□□ -0.31
GPNMB-203ENST00000409458 CDS1Q92903 461 aa13.13□□□□□ -0.31
GPNMB-203ENST00000409458 C7orf34Q96L11 122 aa13.13□□□□□ -0.31
GPNMB-203ENST00000409458 ZNF597Q96LX8 424 aa13.13□□□□□ -0.31
GPNMB-203ENST00000409458 DGAT2Q96PD7 388 aa13.13□□□□□ -0.31
GPNMB-203ENST00000409458 OR1F2PQ96R84 312 aa13.13□□□□□ -0.31
GPNMB-203ENST00000409458 CXorf21Q9HAI6 301 aa13.13□□□□□ -0.31
GPNMB-203ENST00000409458 RXFP3Q9NSD7 469 aa13.13□□□□□ -0.31
GPNMB-203ENST00000409458 OCIAD1Q9NX40 245 aa13.13□□□□□ -0.31
GPNMB-203ENST00000409458 FTSJ1Q9UET6 329 aa13.13□□□□□ -0.31
GPNMB-203ENST00000409458 RARRES3Q9UL19 164 aa13.13□□□□□ -0.31
GPNMB-203ENST00000409458 SRPK3Q9UPE1 567 aa13.13□□□□□ -0.31
GPNMB-203ENST00000409458 ZNF451Q9Y4E5 1061 aa13.13□□□□□ -0.31
GPNMB-203ENST00000409458 GPC6Q9Y625 555 aaPredicted RBP13.13□□□□□ -0.31
GPNMB-203ENST00000409458 PRR33A8MZF0 331 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 HRKO00198 91 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 GNGT2O14610 69 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 EI24O14681 340 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 BMP10O95393 424 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 H6PDO95479 791 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 GP1BAP07359 652 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 S1PR1P21453 382 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 STT3AP46977 705 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 OR1E2P47887 323 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 EFNA3P52797 238 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 NUBP1P53384 320 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 MAPK10P53779 464 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 MAP4K2Q12851 820 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 PPP1R8Q12972 351 aaKnown RBP13.12□□□□□ -0.31
GPNMB-203ENST00000409458 DUSP5Q16690 384 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 DUSP7Q16829 419 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 HEPHL1Q6MZM0 1159 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 TBPL2Q6SJ96 375 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 PIWIL3Q7Z3Z3 882 aaKnown RBP13.12□□□□□ -0.31
GPNMB-203ENST00000409458 TMEM179BQ7Z7N9 219 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 ARMC8Q8IUR7 673 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 PACRGLQ8N7B6 248 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 GPR32P1Q8NGA4 272 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 GEMIN6Q8WXD5 167 aaKnown RBP13.12□□□□□ -0.31
GPNMB-203ENST00000409458 RIT1Q92963 219 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 COL21A1Q96P44 957 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 BTBD9Q96Q07 612 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 ZNF607Q96SK3 696 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 BCL2L10Q9HD36 194 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 GIN1Q9NXP7 522 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 PADI2Q9Y2J8 665 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 LRCH1Q9Y2L9 728 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 HCN4Q9Y3Q4 1203 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 MMACHCQ9Y4U1 282 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 MAGED1Q9Y5V3 778 aaPredicted RBP13.12□□□□□ -0.31
GPNMB-203ENST00000409458 GPR179Q6PRD1 2367 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 CCDC88CQ9P219 2028 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 TNFRSF10AO00220 468 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 SCRG1O75711 98 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 ZIC2O95409 532 aaPredicted RBP13.12□□□□□ -0.31
GPNMB-203ENST00000409458 ZNF806P0C7X5 589 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 CD59P13987 128 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 UQCRBP14927 111 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 ZFP36L1Q07352 338 aaKnown RBP13.12□□□□□ -0.31
GPNMB-203ENST00000409458 GNA13Q14344 377 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 ATAD3BQ5T9A4 648 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 OR2T5Q6IEZ7 315 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 PWWP2BQ6NUJ5 590 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 MED25Q71SY5 747 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 COX15Q7KZN9 410 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 C16orf62Q7Z3J2 963 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 HMGN2P46Q86SG4 172 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 HS3ST5Q8IZT8 346 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 SLC38A9Q8NBW4 561 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 OR2T29Q8NH02 315 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 TSLPQ969D9 159 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 RBM18Q96H35 190 aaKnown RBP13.12□□□□□ -0.31
GPNMB-203ENST00000409458 PTCHD1Q96NR3 888 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 SLC7A5P2Q9GIP4 190 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 APMAPQ9HDC9 416 aa13.12□□□□□ -0.31
GPNMB-203ENST00000409458 DSPPQ9NZW4 1301 aa13.11□□□□□ -0.31
GPNMB-203ENST00000409458 DUXAA6NLW8 204 aa13.11□□□□□ -0.31
GPNMB-203ENST00000409458 EFCAB7A8K855 629 aa13.11□□□□□ -0.31
GPNMB-203ENST00000409458 A8MVJ9 347 aa13.11□□□□□ -0.31
GPNMB-203ENST00000409458 H0YJX3 145 aa13.11□□□□□ -0.31
GPNMB-203ENST00000409458 COQ9O75208 318 aa13.11□□□□□ -0.31
GPNMB-203ENST00000409458 RPSAP08865 295 aaKnown RBP13.11□□□□□ -0.31
GPNMB-203ENST00000409458 SSTR4P31391 388 aa13.11□□□□□ -0.31
GPNMB-203ENST00000409458 DCTP40126 519 aa13.11□□□□□ -0.31
GPNMB-203ENST00000409458 RHAGQ02094 409 aa13.11□□□□□ -0.31
GPNMB-203ENST00000409458 ZNF155Q12901 538 aaPredicted RBP13.11□□□□□ -0.31
GPNMB-203ENST00000409458 SERTAD2Q14140 314 aa13.11□□□□□ -0.31
GPNMB-203ENST00000409458 MINDY4Q4G0A6 757 aa13.11□□□□□ -0.31
GPNMB-203ENST00000409458 VWA2Q5GFL6 755 aa13.11□□□□□ -0.31
GPNMB-203ENST00000409458 C6orf52Q5T4I8 152 aa13.11□□□□□ -0.31
GPNMB-203ENST00000409458 MFSD4BQ5TF39 518 aa13.11□□□□□ -0.31
GPNMB-203ENST00000409458 PRAMEF8Q5VWM4 474 aa13.11□□□□□ -0.31
GPNMB-203ENST00000409458 PRAMEF7Q5VXH5 474 aa13.11□□□□□ -0.31
GPNMB-203ENST00000409458 QSOX2Q6ZRP7 698 aa13.11□□□□□ -0.31
GPNMB-203ENST00000409458 NAXDQ8IW45 347 aa13.11□□□□□ -0.31
GPNMB-203ENST00000409458 CDRT4Q8N9R6 151 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms