RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 TUBD1Q9UJT1 453 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 TCFL5Q9UL49 500 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 VPS4AQ9UN37 437 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 USP22Q9UPT9 525 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 ERVK-19Q9WJR5 959 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 MAN2B2Q9Y2E5 1009 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 NUP210LQ5VU65 1888 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 NUP214P35658 2090 aaPredicted RBP7.78□□□□□ -1.16
GPC3-203ENST00000406757 RNF103-CHMP3A0A140T963 221 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 DYTNA2CJ06 578 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 BLACEA4D250 179 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 BBIP1A8MTZ0 92 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 FXYD1O00168 92 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 UPK1AO00322 258 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 RRP9O43818 475 aaKnown RBP7.77□□□□□ -1.17
GPC3-203ENST00000406757 SORBS2O94875 1100 aaKnown RBP7.77□□□□□ -1.17
GPC3-203ENST00000406757 CELA2AP08217 269 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 RAB40ALP0C0E4 278 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 HOXB9P17482 250 aaPredicted RBP7.77□□□□□ -1.17
GPC3-203ENST00000406757 DDX5P17844 614 aaKnown RBP7.77□□□□□ -1.17
GPC3-203ENST00000406757 S1PR1P21453 382 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 UQCRC2P22695 453 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 PTPN4P29074 926 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 MSX2P35548 267 aaPredicted RBP7.77□□□□□ -1.17
GPC3-203ENST00000406757 CHI3L1P36222 383 aaPredicted RBP7.77□□□□□ -1.17
GPC3-203ENST00000406757 CPOXP36551 454 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 CASRP41180 1078 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 TRPC1P48995 793 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 CCT3P49368 545 aaKnown RBP7.77□□□□□ -1.17
GPC3-203ENST00000406757 ST13P50502 369 aaKnown RBP7.77□□□□□ -1.17
GPC3-203ENST00000406757 NCALDP61601 193 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 CDC20Q12834 499 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 TP53BP2Q13625 1128 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 IL10RAQ13651 578 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 SERTAD2Q14140 314 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 DEFB109BQ30KR1 87 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 TRMT5Q32P41 509 aaKnown RBP7.77□□□□□ -1.17
GPC3-203ENST00000406757 RUNDC3AQ59EK9 446 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 COX20Q5RI15 118 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 NANOGP8Q6NSW7 305 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 TMEM205Q6UW68 189 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 MSANTD1Q6ZTZ1 278 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 MED25Q71SY5 747 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 ZNF771Q7L3S4 317 aaPredicted RBP7.77□□□□□ -1.17
GPC3-203ENST00000406757 OLIG3Q7RTU3 272 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 C6orf120Q7Z4R8 191 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 CPEB2Q7Z5Q1 589 aaKnown RBP7.77□□□□□ -1.17
GPC3-203ENST00000406757 PPP1R32Q7Z5V6 425 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 GALNT12Q8IXK2 581 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 DEFB107AQ8IZN7 70 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 ST13P4Q8IZP2 240 aaPredicted RBP7.77□□□□□ -1.17
GPC3-203ENST00000406757 C10orf111Q8N326 155 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 DPP10Q8N608 796 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 RNF148Q8N7C7 305 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 NUP43Q8NFH3 380 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 OR52R1Q8NGF1 315 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 C9orf43Q8TAL5 461 aaPredicted RBP7.77□□□□□ -1.17
GPC3-203ENST00000406757 KIAA1143Q96AT1 154 aaPredicted RBP7.77□□□□□ -1.17
GPC3-203ENST00000406757 FAM120BQ96EK7 910 aaKnown RBP7.77□□□□□ -1.17
GPC3-203ENST00000406757 ZNF764Q96H86 408 aaPredicted RBP7.77□□□□□ -1.17
GPC3-203ENST00000406757 CLPTM1LQ96KA5 538 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 CGREF1Q99674 301 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 WDR77Q9BQA1 342 aaPredicted RBP7.77□□□□□ -1.17
GPC3-203ENST00000406757 TUBB6Q9BUF5 446 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 THUMPD3Q9BV44 507 aaKnown RBP7.77□□□□□ -1.17
GPC3-203ENST00000406757 NUDT9Q9BW91 350 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 OR8D2Q9GZM6 311 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 WDR54Q9H977 334 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 NANOGQ9H9S0 305 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 LIN28AQ9H9Z2 209 aaKnown RBP7.77□□□□□ -1.17
GPC3-203ENST00000406757 CXorf21Q9HAI6 301 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 ADAP2Q9NPF8 381 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 ZCCHC3Q9NUD5 404 aaKnown RBP7.77□□□□□ -1.17
GPC3-203ENST00000406757 MRGBPQ9NV56 204 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 GID8Q9NWU2 228 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 CMTM6Q9NX76 183 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 TAS2R1Q9NYW7 299 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 ANAPC2Q9UJX6 822 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 HS3ST3B1Q9Y662 390 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 NBPF19A0A087WUL8 3843 aa7.77□□□□□ -1.17
GPC3-203ENST00000406757 TRBV5-3A0A0A0MS03 114 aa7.76□□□□□ -1.17
GPC3-203ENST00000406757 CLIC1O00299 241 aa7.76□□□□□ -1.17
GPC3-203ENST00000406757 SOCS6O14544 535 aa7.76□□□□□ -1.17
GPC3-203ENST00000406757 GYG2O15488 501 aa7.76□□□□□ -1.17
GPC3-203ENST00000406757 EMC8O43402 210 aa7.76□□□□□ -1.17
GPC3-203ENST00000406757 ERN1O75460 977 aaKnown RBP7.76□□□□□ -1.17
GPC3-203ENST00000406757 DDAH2O95865 285 aa7.76□□□□□ -1.17
GPC3-203ENST00000406757 CBX7O95931 251 aa7.76□□□□□ -1.17
GPC3-203ENST00000406757 CLPSP04118 112 aa7.76□□□□□ -1.17
GPC3-203ENST00000406757 ATP1B1P05026 303 aa7.76□□□□□ -1.17
GPC3-203ENST00000406757 KRT16P08779 473 aa7.76□□□□□ -1.17
GPC3-203ENST00000406757 SLC6A2P23975 617 aa7.76□□□□□ -1.17
GPC3-203ENST00000406757 SLC7A2P52569 658 aa7.76□□□□□ -1.17
GPC3-203ENST00000406757 MAP4K2Q12851 820 aa7.76□□□□□ -1.17
GPC3-203ENST00000406757 MLC1Q15049 377 aa7.76□□□□□ -1.17
GPC3-203ENST00000406757 PCOLCEQ15113 449 aa7.76□□□□□ -1.17
GPC3-203ENST00000406757 LACTB2Q53H82 288 aaPredicted RBP7.76□□□□□ -1.17
GPC3-203ENST00000406757 COQ5Q5HYK3 327 aa7.76□□□□□ -1.17
GPC3-203ENST00000406757 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.76□□□□□ -1.17
GPC3-203ENST00000406757 LRIF1Q5T3J3 769 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms