RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 NLRP11P59045 1033 aaKnown RBP4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 KRTAP10-11P60412 298 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 SNRPD1P62314 119 aaKnown RBP4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 CYCSP99999 105 aaKnown RBP4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 HSF2Q03933 536 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 IMMTQ16891 758 aaKnown RBP4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 CCDC183Q5T5S1 534 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 ZSCAN25Q6NSZ9 544 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 Q6ZRG5 221 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 TMEM26Q6ZUK4 368 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 Q71RC1 249 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 PARP8Q8N3A8 854 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 GVQW1Q8N7I0 195 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 BCORP1Q8N888 145 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 DENND6BQ8NEG7 585 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 TRIM58Q8NG06 486 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 OR9Q2Q8NGE9 314 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 GPR148Q8TDV2 347 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 CHPT1Q8WUD6 406 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 AZIN2Q96A70 460 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 TMEM45BQ96B21 275 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 TRIM44Q96DX7 344 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 MRPL53Q96EL3 112 aaKnown RBP4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 C16orf58Q96GQ5 468 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 PIGQQ9BRB3 760 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 KCNK13Q9HB14 408 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 NMUR1Q9HB89 426 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 TECRQ9NZ01 308 aaKnown RBP4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 KLK11Q9UBX7 282 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 PPP1R3CQ9UQK1 317 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 PARP4Q9UKK3 1724 aaKnown RBP4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 ELP1O95163 1332 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 UBN2Q6ZU65 1347 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 MROH5Q6ZUA9 1318 aa4.11□□□□□ -1.75
HMGB3P18-201ENST00000406327 ZNF195O14628 629 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 JAK2O60674 1132 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 LRCH4O75427 683 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 TOM1L1O75674 476 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 ANXA9O76027 345 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 MFN2O95140 757 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 CTDNEP1O95476 244 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 IGLV2-11P01706 119 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 GSTA1P08263 222 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 UQCRFS1P1P0C7P4 283 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 CALCBP10092 127 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 NCF1P14598 390 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 ERVK-16P61578 105 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 HMGN5P82970 282 aaKnown RBP4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 ITPK1Q13572 414 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 TPD52L1Q16890 204 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 WSCD2Q2TBF2 565 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 HLA-BQ31612 363 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 AGKQ53H12 422 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 LIPJQ5W064 366 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 CES4AQ5XG92 561 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 GALNT17Q6IS24 598 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 ZNF730Q6ZMV8 503 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 BHLHA9Q7RTU4 235 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 FAM184AQ8NB25 1140 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 MINDY2Q8NBR6 621 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 DDHD1Q8NEL9 900 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 OR52B4Q8NGK2 314 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 SELENOMQ8WWX9 145 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 TMEM37Q8WXS4 190 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 TMEM190Q8WZ59 177 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 THRSPQ92748 146 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 PCED1BQ96HM7 432 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 TPPP3Q9BW30 176 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 CLEC7AQ9BXN2 247 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 CCSER1Q9C0I3 900 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 ZSCAN16Q9H4T2 348 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 MED20Q9H944 212 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 COG4Q9H9E3 785 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 FARSBQ9NSD9 589 aaKnown RBP4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 NLGN3Q9NZ94 848 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 LHX3Q9UBR4 397 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 CHMP2BQ9UQN3 213 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 RNF215Q9Y6U7 377 aa4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 GREB1LQ9C091 1923 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P18-201ENST00000406327 ARID2Q68CP9 1835 aa4.09□□□□□ -1.75
HMGB3P18-201ENST00000406327 XIRP1Q702N8 1843 aaKnown RBP4.09□□□□□ -1.75
HMGB3P18-201ENST00000406327 TUBGCP6Q96RT7 1819 aa4.09□□□□□ -1.75
HMGB3P18-201ENST00000406327 DOCK7Q96N67 2140 aa4.09□□□□□ -1.75
HMGB3P18-201ENST00000406327 A0A1B0GWJ7 208 aa4.09□□□□□ -1.75
HMGB3P18-201ENST00000406327 A0A1W2PR80 420 aa4.09□□□□□ -1.75
HMGB3P18-201ENST00000406327 MEI4A8MW99 385 aa4.09□□□□□ -1.75
HMGB3P18-201ENST00000406327 HHLA1C9JL84 531 aa4.09□□□□□ -1.75
HMGB3P18-201ENST00000406327 GPAA1O43292 621 aa4.09□□□□□ -1.75
HMGB3P18-201ENST00000406327 TNFSF12O43508 249 aa4.09□□□□□ -1.75
HMGB3P18-201ENST00000406327 MAGEC1O60732 1142 aa4.09□□□□□ -1.75
HMGB3P18-201ENST00000406327 TOM1O60784 492 aa4.09□□□□□ -1.75
HMGB3P18-201ENST00000406327 VPS26AO75436 327 aa4.09□□□□□ -1.75
HMGB3P18-201ENST00000406327 KRT8P05787 483 aa4.09□□□□□ -1.75
HMGB3P18-201ENST00000406327 FCER2P06734 321 aa4.09□□□□□ -1.75
HMGB3P18-201ENST00000406327 FUT1P19526 365 aa4.09□□□□□ -1.75
HMGB3P18-201ENST00000406327 PRDX2P32119 198 aa4.09□□□□□ -1.75
HMGB3P18-201ENST00000406327 ZFP36L2P47974 494 aaKnown RBP4.09□□□□□ -1.75
HMGB3P18-201ENST00000406327 TRPC1P48995 793 aa4.09□□□□□ -1.75
HMGB3P18-201ENST00000406327 NDST1P52848 882 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms