RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 CSTF2P33240 577 aaKnown RBP eCLIP9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 HSD17B2P37059 387 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 STXBP1P61764 594 aaKnown RBP9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 RPE65Q16518 533 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 C1orf53Q5VUE5 145 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 PLAG1Q6DJT9 500 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 CDC73Q6P1J9 531 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 ZNF765Q7L2R6 523 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 C11orf24Q96F05 449 aaPredicted RBP9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 TMEM80Q96HE8 168 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 OR2M4Q96R27 311 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 MCHR1Q99705 422 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 RACGAP1Q9H0H5 632 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 PELI2Q9HAT8 420 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 MGAT4BQ9UQ53 548 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 RPL36Q9Y3U8 105 aaKnown RBP9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 CASKO14936 926 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 PRKYO43930 277 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 OR10H2O60403 315 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 B4GALT2O60909 372 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 FHP07954 510 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 CTSEP14091 401 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 IGFBP4P22692 258 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 TLX1P31314 330 aaPredicted RBP9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 IFITM3Q01628 133 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 ZNF91Q05481 1191 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 NIPAL1Q6NVV3 410 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 ARMC6Q6NXE6 501 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 ADAMTSL4Q6UY14 1074 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 TAF8Q7Z7C8 310 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 SFTPA2Q8IWL1 248 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 SIMC1Q8NDZ2 872 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 UBASH3BQ8TF42 649 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 RERGQ96A58 199 aaPredicted RBP9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 CNRIP1Q96F85 164 aaPredicted RBP9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 FCRL1Q96LA6 429 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 DMRTB1Q96MA1 342 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 SLC38A2Q96QD8 506 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 KLHL1Q9NR64 748 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 WDR45Q9Y484 360 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 CSNK1G3Q9Y6M4 447 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 PMF1-BGLAPU3KQ54 211 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 WDR87Q6ZQQ6 2873 aa9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 COL4A4P53420 1690 aaPredicted RBP9.84□□□□□ -0.83
CPSF1P1-201ENST00000397477 STK25O00506 426 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 EML2O95834 649 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 CSF2P04141 144 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 CHRM4P08173 479 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 PAICSP22234 425 aaKnown RBP9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 MMP11P24347 488 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 ATP5A1P25705 553 aaKnown RBP9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 REEP5Q00765 189 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 PDE7AQ13946 482 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 SHHQ15465 462 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 TBCEQ15813 527 aaPredicted RBP9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 RNASE12Q5GAN4 147 aaKnown RBP9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 ACSM5Q6NUN0 579 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 LAPTM4BQ86VI4 370 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 NRMQ8IXM6 262 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 RBM12BQ8IXT5 1001 aaKnown RBP9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 LRRC56Q8IYG6 542 aaPredicted RBP9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 SLC16A11Q8NCK7 471 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 OR2L3Q8NG85 312 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 CAPSLQ8WWF8 208 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 DIRAS2Q96HU8 199 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 CNDP2Q96KP4 475 aaKnown RBP9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 TM9SF2Q99805 663 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 PRUNE2Q8WUY3 3088 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 FAAHO00519 579 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 ADH1BP00325 375 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 GNSP15586 552 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 ACSL1P33121 698 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 CCR4P51679 360 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 MRPS15P82914 257 aaKnown RBP9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 DUSP2Q05923 314 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 ZNF791Q3KP31 576 aaPredicted RBP9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 PYDC2Q56P42 97 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 PDZK1Q5T2W1 519 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 SAXO2Q658L1 398 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 PGBD2Q6P3X8 592 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 SLC46A3Q7Z3Q1 461 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 KIAA0907Q7Z7F0 614 aaPredicted RBP9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 CADM2Q8N3J6 435 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 C10orf53Q8N6V4 93 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 CHPT1Q8WUD6 406 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 RASSF5Q8WWW0 418 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 CDS1Q92903 461 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 HDHD5Q9BXW7 423 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 GABARAPL3Q9BY60 117 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 CHST8Q9H2A9 424 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 ICKQ9UPZ9 632 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 ADAP00813 363 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 CEACAM5P06731 702 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 MRPL3P09001 348 aaKnown RBP9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 CLEC2LP0C7M8 214 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 NTSR1P30989 418 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 IGFALSP35858 605 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 KCNJ5P48544 419 aa9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 HNRNPA0Q13151 305 aaKnown RBP9.83□□□□□ -0.84
CPSF1P1-201ENST00000397477 INAVAQ3KP66 663 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms