RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 GIMAP5Q96F15 307 aa21.95■■□□□ 1.1
TSPAN4-202ENST00000397396 IP6K3Q96PC2 410 aa21.95■■□□□ 1.1
TSPAN4-202ENST00000397396 TRIM8Q9BZR9 551 aa21.95■■□□□ 1.1
TSPAN4-202ENST00000397396 OR8D2Q9GZM6 311 aa21.95■■□□□ 1.1
TSPAN4-202ENST00000397396 TMEM38AQ9H6F2 299 aa21.95■■□□□ 1.1
TSPAN4-202ENST00000397396 GPN2Q9H9Y4 310 aaPredicted RBP21.95■■□□□ 1.1
TSPAN4-202ENST00000397396 EQTNQ9NQ60 294 aa21.95■■□□□ 1.1
TSPAN4-202ENST00000397396 PPIEQ9UNP9 301 aaKnown RBP21.95■■□□□ 1.1
TSPAN4-202ENST00000397396 LOC101059948A0A1B0GTJ6 334 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 GMNNO75496 209 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 DDAH2O95865 285 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 IGKV3-11P04433 115 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 ZNF155Q12901 538 aaPredicted RBP21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 GNA13Q14344 377 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 EXOSC7Q15024 291 aaKnown RBP21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 EXT1Q16394 746 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 ATAD3BQ5T9A4 648 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 C11orf65Q8NCR3 313 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 OR1N1Q8NGS0 311 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 JADE3Q92613 823 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 ASB9Q96DX5 294 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 ZNF583Q96ND8 569 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 STACQ99469 402 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 SCNM1Q9BWG6 230 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 ZNF700Q9H0M5 742 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 OR51I1Q9H343 314 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 EXD2Q9NVH0 621 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 P2RX2Q9UBL9 471 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 MSRB2Q9Y3D2 182 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 ZNF451Q9Y4E5 1061 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 HEMK1Q9Y5R4 338 aaPredicted RBP21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 HS3ST3B1Q9Y662 390 aa21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 NUP214P35658 2090 aaPredicted RBP21.94■■□□□ 1.1
TSPAN4-202ENST00000397396 ELOVL7A1L3X0 281 aa21.93■■□□□ 1.1
TSPAN4-202ENST00000397396 TNFRSF21O75509 655 aa21.93■■□□□ 1.1
TSPAN4-202ENST00000397396 PDE5AO76074 875 aa21.93■■□□□ 1.1
TSPAN4-202ENST00000397396 ALOX5P09917 674 aa21.93■■□□□ 1.1
TSPAN4-202ENST00000397396 ETFAP13804 333 aa21.93■■□□□ 1.1
TSPAN4-202ENST00000397396 SSTR4P31391 388 aa21.93■■□□□ 1.1
TSPAN4-202ENST00000397396 FOXL2P58012 376 aa21.93■■□□□ 1.1
TSPAN4-202ENST00000397396 PSPHP78330 225 aa21.93■■□□□ 1.1
TSPAN4-202ENST00000397396 ZNF630Q2M218 657 aaPredicted RBP21.93■■□□□ 1.1
TSPAN4-202ENST00000397396 TNFAIP8L2Q6P589 184 aaPredicted RBP21.93■■□□□ 1.1
TSPAN4-202ENST00000397396 IFNEQ86WN2 208 aa21.93■■□□□ 1.1
TSPAN4-202ENST00000397396 HPS6Q86YV9 775 aa21.93■■□□□ 1.1
TSPAN4-202ENST00000397396 ZNF615Q8N8J6 731 aa21.93■■□□□ 1.1
TSPAN4-202ENST00000397396 ZNF721Q8TF20 911 aa21.93■■□□□ 1.1
TSPAN4-202ENST00000397396 VMP1Q96GC9 406 aa21.93■■□□□ 1.1
TSPAN4-202ENST00000397396 CLPTM1LQ96KA5 538 aa21.93■■□□□ 1.1
TSPAN4-202ENST00000397396 TMEM121BQ9BXQ6 578 aaPredicted RBP21.93■■□□□ 1.1
TSPAN4-202ENST00000397396 DUSP22Q9NRW4 184 aa21.93■■□□□ 1.1
TSPAN4-202ENST00000397396 MAGEL2Q9UJ55 1249 aa21.93■■□□□ 1.1
TSPAN4-202ENST00000397396 DMXL1Q9Y485 3027 aa21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 IGHV1-45A0A0A0MS14 117 aa21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 AK1P00568 194 aa21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 GZMMP51124 257 aa21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 SLC37A1P57057 533 aa21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 DCAF7P61962 342 aa21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 EEF1A2Q05639 463 aaKnown RBP21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 TRAP1Q12931 704 aaKnown RBP21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 TRIM25Q14258 630 aaKnown RBP21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 VMACQ2NL98 169 aa21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 COX20Q5RI15 118 aa21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 SLC29A4Q7RTT9 530 aa21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 MICU2Q8IYU8 434 aa21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 HORMAD2Q8N7B1 307 aa21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 RNF148Q8N7C7 305 aa21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 CCDC124Q96CT7 223 aaKnown RBP21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 WDR77Q9BQA1 342 aaPredicted RBP21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 LMF2Q9BU23 707 aaKnown RBP21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 TRIM15Q9C019 465 aa21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 SEMA4CQ9C0C4 833 aa21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 PIGUQ9H490 435 aa21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 ANKRA2Q9H9E1 313 aa21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 FOLH1BQ9HBA9 442 aa21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 A4GALTQ9NPC4 353 aa21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 SLC7A8Q9UHI5 535 aa21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 LIPT1Q9Y234 373 aa21.92■■□□□ 1.1
TSPAN4-202ENST00000397396 GSTA4O15217 222 aa21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 SEC24DO94855 1032 aaPredicted RBP21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 TCN1P20061 433 aaPredicted RBP21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 OTX2P32243 289 aa21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 EMDP50402 254 aa21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 SLC26A5P58743 744 aa21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 RPS18P62269 152 aaKnown RBP21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 RPS26P62854 115 aaKnown RBP21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 AP2B1P63010 937 aa21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 VEZF1Q14119 521 aa21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 MYBPC3Q14896 1274 aa21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 PCOLCEQ15113 449 aa21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 FXNQ16595 210 aa21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 INTS11Q5TA45 600 aaKnown RBP21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 NDUFAF7Q7L592 441 aa21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 PROSER1Q86XN7 944 aa21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 PTRH1Q86Y79 214 aaKnown RBP21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 NFAM1Q8NET5 270 aaPredicted RBP21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 OR8K3Q8NH51 312 aa21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 C16orf52Q8NHV5 167 aa21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 SLC9A6Q92581 669 aa21.91■■□□□ 1.1
TSPAN4-202ENST00000397396 HOXB13Q92826 284 aaPredicted RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms