RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 ENOPH1Q9UHY7 261 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 MAPRE3Q9UPY8 281 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 NTNG1Q9Y2I2 539 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 A0A087WUU8 490 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 STK25O00506 426 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 TGM5O43548 720 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 STATHP02808 62 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 SRPRAP08240 638 aaKnown RBP13.13□□□□□ -0.31
NUP98-204ENST00000397004 POU3F3P20264 500 aaPredicted RBP13.13□□□□□ -0.31
NUP98-204ENST00000397004 EVX1P49640 407 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 GNG2P59768 71 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 TNK1Q13470 666 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 EOGTQ5NDL2 527 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 C1orf94Q6P1W5 598 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 PRICKLE2Q7Z3G6 844 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 SLC39A11Q8N1S5 342 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 TDP1Q9NUW8 608 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 MRPS18AQ9NVS2 196 aaKnown RBP13.13□□□□□ -0.31
NUP98-204ENST00000397004 MCUBQ9NWR8 336 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 CNIH4Q9P003 139 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 SLC23A1Q9UHI7 598 aa13.13□□□□□ -0.31
NUP98-204ENST00000397004 SIRT4Q9Y6E7 314 aaPredicted RBP13.13□□□□□ -0.31
NUP98-204ENST00000397004 A0A1B0GVC2 190 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 A6NIN4 97 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 C4orf51C9J302 202 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 PTNP21246 168 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 PNLIPRP1P54315 467 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 C3orf38Q5JPI3 329 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 CD300LDQ6UXZ3 194 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 TMEM91Q6ZNR0 172 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 PARS2Q7L3T8 475 aaKnown RBP13.12□□□□□ -0.31
NUP98-204ENST00000397004 LAPTM4BQ86VI4 370 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 FBXO15Q8NCQ5 510 aaPredicted RBP13.12□□□□□ -0.31
NUP98-204ENST00000397004 OR4M2Q8NGB6 313 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 CITED4Q96RK1 184 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 RBFOX1Q9NWB1 397 aaKnown RBP13.12□□□□□ -0.31
NUP98-204ENST00000397004 IL20RAQ9UHF4 553 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 AKAP8O43823 692 aaKnown RBP13.12□□□□□ -0.31
NUP98-204ENST00000397004 THY1P04216 161 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 MAP2K3P46734 347 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 POLR2LP62875 67 aaKnown RBP13.12□□□□□ -0.31
NUP98-204ENST00000397004 DEDD2Q8WXF8 326 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 MACROD1Q9BQ69 325 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 SAP130Q9H0E3 1048 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 SYNPO2LQ9H987 977 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 SEC14L3Q9UDX4 400 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 MYO7AQ13402 2215 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 SLC2A10O95528 541 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 ALDH6A1Q02252 535 aaKnown RBP13.12□□□□□ -0.31
NUP98-204ENST00000397004 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.12□□□□□ -0.31
NUP98-204ENST00000397004 CLEC12AQ5QGZ9 265 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 RAET1EQ8TD07 263 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 SMPDL3AQ92484 453 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 MRPS31Q92665 395 aaKnown RBP13.12□□□□□ -0.31
NUP98-204ENST00000397004 GFM1Q96RP9 751 aaKnown RBP13.12□□□□□ -0.31
NUP98-204ENST00000397004 TMED9Q9BVK6 235 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 OR51I1Q9H343 314 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 FGF20Q9NP95 211 aaPredicted RBP13.12□□□□□ -0.31
NUP98-204ENST00000397004 SLC25A13Q9UJS0 675 aa13.12□□□□□ -0.31
NUP98-204ENST00000397004 SPTBN5Q9NRC6 3674 aaKnown RBP13.11□□□□□ -0.31
NUP98-204ENST00000397004 TSPAN11A1L157 253 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 C5orf58C9J3I9 102 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 MMP20O60882 483 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 PAPLNO95428 1278 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 CH25HO95992 272 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 PAHP00439 452 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 ACP2P11117 423 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 SLC2A2P11168 524 aaPredicted RBP13.11□□□□□ -0.31
NUP98-204ENST00000397004 CYP2A6P11509 494 aaPredicted RBP13.11□□□□□ -0.31
NUP98-204ENST00000397004 TYRP14679 529 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 TBXA2RP21731 343 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 MAPK12P53778 367 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 SNAPC1Q16533 368 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 ENTPD8Q5MY95 495 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 DPPA4Q7L190 304 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 XAGE5Q8WWM1 108 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 ZC3HAV1LQ96H79 300 aaKnown RBP13.11□□□□□ -0.31
NUP98-204ENST00000397004 TMEM43Q9BTV4 400 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 MENTQ9BUN1 341 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 TM7SF3Q9NS93 570 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 SLC23A2Q9UGH3 650 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 DYRK1BQ9Y463 629 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 GLOD5A6NK44 160 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 LILRB3O75022 631 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 FGF9P31371 208 aaPredicted RBP13.11□□□□□ -0.31
NUP98-204ENST00000397004 PRR23CQ6ZRP0 262 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 MRGPREQ86SM8 312 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 OR5H6Q8NGV6 325 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 OR4Q3Q8NH05 313 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 TMEM163Q8TC26 289 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 ZNF296Q8WUU4 475 aaPredicted RBP13.11□□□□□ -0.31
NUP98-204ENST00000397004 OR5P2Q8WZ92 322 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 MARVELD1Q9BSK0 173 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 NFKBIL1Q9UBC1 381 aaPredicted RBP13.11□□□□□ -0.31
NUP98-204ENST00000397004 TMEM129A0AVI4 362 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 ZNF197O14709 1029 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 SLC28A2O43868 658 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 LCMT2O60294 686 aaKnown RBP13.11□□□□□ -0.31
NUP98-204ENST00000397004 ZIC2O95409 532 aaPredicted RBP13.11□□□□□ -0.31
NUP98-204ENST00000397004 HOXB3P14651 431 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms