RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 CSNK1G3Q9Y6M4 447 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 ARHGAP33O14559 1287 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF888P0CJ79 500 aaPredicted RBP6.21□□□□□ -1.42
SMC1A-202ENST00000375340 MC3RP41968 323 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 ACTR1BP42025 376 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 S100A10P60903 97 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 ACTR1AP61163 376 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 NDUFAF5Q5TEU4 345 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 ZC3H14Q6PJT7 736 aaKnown RBP6.21□□□□□ -1.42
SMC1A-202ENST00000375340 NOXA1Q86UR1 476 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 LNX2Q8N448 690 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 WFIKKN2Q8TEU8 576 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 HERVK_113Q902F9 699 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 PMM1Q92871 262 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 TESCQ96BS2 214 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 STARD5Q9NSY2 213 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 CORINQ9Y5Q5 1042 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 KANTRA0A1W2PQU2 76 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 OR2A25A4D2G3 310 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 ASPDHA6ND91 283 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 ECDO95905 644 aaPredicted RBP6.21□□□□□ -1.42
SMC1A-202ENST00000375340 HSD3B1P14060 373 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 HSD3B2P26439 372 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 HOXD9P28356 352 aaPredicted RBP6.21□□□□□ -1.42
SMC1A-202ENST00000375340 SSTR2P30874 369 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF234Q14588 700 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 ALG11Q2TAA5 492 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 AMZ1Q400G9 498 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 PODNL1Q6PEZ8 512 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 SBSNQ6UWP8 590 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF248Q8NDW4 579 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 WFDC5Q8TCV5 224 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF514Q96K75 400 aaPredicted RBP6.21□□□□□ -1.42
SMC1A-202ENST00000375340 BCL7BQ9BQE9 202 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 CPNE5Q9HCH3 593 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 FBXL12Q9NXK8 326 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 VNN3Q9NY84 501 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 RDH8Q9NYR8 311 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 FBXL21Q9UKT6 434 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 PTPRFP10586 1907 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 OR2B3O76000 313 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 SCGB1D2O95969 90 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 ASGR2P07307 311 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 IGFBP1P08833 259 aaPredicted RBP6.21□□□□□ -1.42
SMC1A-202ENST00000375340 HTR1AP08908 422 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 TNFSF8P32971 234 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 MTNR1AP48039 350 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 VSX2P58304 361 aaPredicted RBP6.21□□□□□ -1.42
SMC1A-202ENST00000375340 TMPRSS9Q7Z410 1059 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 BTLAQ7Z6A9 289 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 CADM3Q8N126 398 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 VWA5B2Q8N398 1253 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 OR51L1Q8NGJ5 315 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 DPH7Q9BTV6 452 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 SLA2Q9H6Q3 261 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 CUEDC1Q9NWM3 386 aaPredicted RBP6.21□□□□□ -1.42
SMC1A-202ENST00000375340 MED11Q9P086 117 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 A0A1W2PP55 124 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 MEIOCA2RUB1 952 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 C11orf98E9PRG8 122 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 M0R233 179 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 LYRM1O43325 122 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 CDC40O60508 579 aaKnown RBP eCLIP6.21□□□□□ -1.42
SMC1A-202ENST00000375340 TYRP1P17643 537 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 NOGQ13253 232 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 B3GLCTQ6Y288 498 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 VRK2Q86Y07 508 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF615Q8N8J6 731 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 ANKK1Q8NFD2 765 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 OR7G3Q8NG95 312 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 QRSL1Q9H0R6 528 aaKnown RBP6.21□□□□□ -1.42
SMC1A-202ENST00000375340 RDH14Q9HBH5 336 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 CLEC2DQ9UHP7 191 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 CDH10Q9Y6N8 788 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 ENPP4Q9Y6X5 453 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 A0A1W2PRQ8 180 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 GPR37L1O60883 481 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 ACPPP15309 386 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 RPL34P49207 117 aaKnown RBP6.21□□□□□ -1.42
SMC1A-202ENST00000375340 NTRK2Q16620 822 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 XKR7Q5GH72 579 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 OR2G6Q5TZ20 316 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 ZCCHC12Q6PEW1 402 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 TSACCQ96A04 125 aaPredicted RBP6.21□□□□□ -1.42
SMC1A-202ENST00000375340 LAMP5Q9UJQ1 280 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 PCDHGB1Q9Y5G3 927 aa6.21□□□□□ -1.42
SMC1A-202ENST00000375340 GRXCR2A6NFK2 248 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 TMEM202A6NGA9 273 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 PIP5K1CO60331 668 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 F8A1P23610 371 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 HOXC13P31276 330 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 AKT2P31751 481 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 IDUAP35475 653 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 GNG2P59768 71 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 MBTPS1Q14703 1052 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 GLCCI1Q86VQ1 547 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 OR4F15Q8NGB8 312 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 OR5W2Q8NH69 310 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.2□□□□□ -1.426e-12■■■□□ 16.2
SMC1A-202ENST00000375340 PCNPQ8WW12 178 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms